C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spalt-like transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000570206 SALL1-003 ENSG00000103449 9606 - 16:51137332-51150597 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000570206
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000570206 0.016±0.00 0.025±0.00 2.170±0.00 1.071±0.69 0.111±0.00 0.426±0.00 0.096±0.00 2.212±0.00 0.386±0.00 0.869±0.00 0.503±0.24 0.371±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0001 UCNEbase 16:50459337-51906374
CIL_00085B CIL_00085B_0001 VISTA 16:50535781-51137187
CIL_00090J CIL_00090J_0001 VISTA 16:50540952-51141798
CIL_00090K CIL_00090K_0001 VISTA 16:50643117-51244272
CIL_00090L CIL_00090L_0001 VISTA 16:50648118-51248778
CIL_00090M CIL_00090M_0001 VISTA 16:50676779-51277697
CIL_00090N CIL_00090N_0001 VISTA 16:50708342-51309204
CIL_0008AU CIL_0008AU_0001 VISTA 16:50722400-51323681
CIL_00077S CIL_00077S_0001 CGP 16:50742050-51151367
CIL_0008AT CIL_0008AT_0001 VISTA 16:50772237-51373198
CIL_0008AL CIL_0008AL_0001 VISTA 16:50795296-51396395
CIL_0007ZD CIL_0007ZD_0001 VISTA 16:50810409-51413005
CIL_0007WV CIL_0007WV_0001 VISTA 16:50813101-51414731
CIL_0008AK CIL_0008AK_0001 VISTA 16:50897210-51498451
CIL_0008AN CIL_0008AN_0001 VISTA 16:51055384-51656808

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034090 Sall1-201 protein_coding Mus_musculus 0 4268
ENSMUST00000057950 Sall3-201 protein_coding Mus_musculus 0 300
ENSDART00000111842 sall1a-001 protein_coding Danio_rerio 0 196
ENSDART00000106246 CABZ01006835.1-201 protein_coding Danio_rerio 0.00007 55
ENSDART00000130639 FP074874.1-201 protein_coding Danio_rerio 0.00007 55
ENSDART00000133285 si:dkey-15h8.16-005 retained_intron Danio_rerio 0.00007 55
ENSDART00000144888 si:dkey-15h8.16-003 processed_transcript Danio_rerio 0.00007 55
ENSDART00000139025 si:dkey-15h8.16-006 processed_transcript Danio_rerio 0.00007 55
ENSDART00000133211 si:dkey-15h8.16-001 protein_coding Danio_rerio 0.00007 55
ENSMUST00000075263 Zfp26-004 retained_intron Mus_musculus 0.0003 53
ENSMUST00000098970 Zfp26-002 retained_intron Mus_musculus 0.0003 53
ENSMUST00000159569 Zfp26-001 protein_coding Mus_musculus 0.0003 53
ENSDART00000090292 ctnnd2b-001 protein_coding Danio_rerio 0.0004 53

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