C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spalt-like transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000573324 SALL3-003 ENSG00000256463 9606 + 18:78994798-79002677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleTestisENST00000573324
Transcript ID Brain Liver Muscle Testis
ENST00000573324 1.176±0.00 0.094±0.00 0.086±0.00 0.624±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000018 CIL_000018_0002 CGP 18:77250549-79002677
CIL_0007MA CIL_0007MA_0003 UCNEbase 18:78027502-79284092
CIL_0007YX CIL_0007YX_0001 VISTA 18:78401276-79002723
CIL_0008XA CIL_0008XA_0001 VISTA 18:78421722-79023257
CIL_00094I CIL_00094I_0001 VISTA 18:78457730-79058836
CIL_0008KF CIL_0008KF_0001 VISTA 18:78942193-79542977
CIL_0008IX CIL_0008IX_0001 VISTA 18:78950009-79550795
CIL_000015 CIL_000015_0002 CGP 18:78980275-79378283

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057950 Sall3-201 protein_coding Mus_musculus 0 462

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