C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000578234 SMARCD2-009 ENSG00000108604 9606 - 17:63834178-63835657 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaENST00000578234
Transcript ID Muscle Placenta
ENST00000578234 5.726±0.00 10.435±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0006QA CIL_0006QA_0001 CGP 17:63827152-63843065

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021052 Smarcd2-001 protein_coding Mus_musculus 0 619
ENSMUST00000106843 Smarcd2-002 protein_coding Mus_musculus 0 619
ENSMUST00000155243 Smarcd2-003 processed_transcript Mus_musculus 0 390

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