C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006QA_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000087191-ENSG00000108604 | CGP | 9606 | 17:63827152-63843065  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000087191  (PSMC5)proteasome (prosome, macropain) 26S subunit, ATPase, 5 |
ENST00000310144 (PSMC5-001)
|
63827183-63832019 | protein_coding | |
|
ENST00000375812 (PSMC5-201)
|
63827684-63832026 | protein_coding | ||
|
ENST00000578570 (PSMC5-005)
|
63827490-63832018 | retained_intron | ||
|
ENST00000579031 (PSMC5-014)
|
63830065-63831424 | retained_intron | ||
|
ENST00000579147 (PSMC5-003)
|
63827460-63832019 | retained_intron | ||
|
ENST00000579708 (PSMC5-008)
|
63827152-63830917 | protein_coding | ||
|
ENST00000580063 (PSMC5-015)
|
63830682-63831523 | retained_intron | ||
|
ENST00000580265 (PSMC5-009)
|
63827703-63828562 | retained_intron | ||
|
ENST00000580864 (PSMC5-004)
|
63827460-63832019 | protein_coding | ||
|
ENST00000581764 (PSMC5-002)
|
63827460-63831118 | retained_intron | ||
|
ENST00000581842 (PSMC5-018)
|
63827446-63830925 | protein_coding | ||
|
ENST00000581882 (PSMC5-006)
|
63827878-63831986 | protein_coding | ||
|
ENST00000582130 (PSMC5-011)
|
63827453-63831203 | protein_coding | ||
|
ENST00000582420 (PSMC5-010)
|
63827433-63827922 | processed_transcript | ||
|
ENST00000583283 (PSMC5-012)
|
63827460-63829540 | retained_intron | ||
|
ENST00000584320 (PSMC5-020)
|
63827455-63831105 | protein_coding | ||
|
ENST00000584536 (PSMC5-013)
|
63827472-63831425 | nonsense_mediated_decay | ||
|
ENST00000584657 (PSMC5-017)
|
63831339-63832019 | retained_intron | ||
|
ENST00000584880 (PSMC5-016)
|
63830386-63831553 | nonsense_mediated_decay | ||
|
ENST00000585123 (PSMC5-019)
|
63827460-63831151 | protein_coding | ||
|
ENST00000585242 (PSMC5-007)
|
63827479-63831984 | nonsense_mediated_decay | ||
|
ENSG00000108592 (FTSJ3) FtsJ homolog 3 (E. coli) |
ENST00000427159 (FTSJ3-001)
|
63819433-63827671 | protein_coding | |
|
ENST00000577263 (FTSJ3-008)
|
63825831-63827098 | retained_intron | ||
|
ENST00000579569 (FTSJ3-007)
|
63825343-63826910 | nonsense_mediated_decay | ||
|
ENST00000579831 (FTSJ3-012)
|
63821429-63823891 | nonsense_mediated_decay | ||
|
ENST00000580129 (FTSJ3-011)
|
63824084-63824595 | retained_intron | ||
|
ENST00000580272 (FTSJ3-017)
|
63825384-63827064 | protein_coding | ||
|
ENST00000580290 (FTSJ3-009)
|
63825927-63827070 | retained_intron | ||
|
ENST00000580295 (FTSJ3-016)
|
63827115-63830012 | processed_transcript | ||
|
ENST00000580376 (FTSJ3-018)
|
63823590-63824386 | retained_intron | ||
|
ENST00000581209 (FTSJ3-015)
|
63825591-63827329 | protein_coding | ||
|
ENST00000582476 (FTSJ3-006)
|
63826072-63827106 | retained_intron | ||
|
ENST00000583202 (FTSJ3-014)
|
63820259-63822023 | retained_intron | ||
|
ENST00000583901 (FTSJ3-013)
|
63820915-63822189 | retained_intron | ||
|
ENST00000584193 (FTSJ3-010)
|
63825343-63826930 | nonsense_mediated_decay | ||
|
ENST00000584574 (FTSJ3-005)
|
63826639-63827647 | protein_coding | ||
|
ENST00000585145 (FTSJ3-004)
|
63826845-63827647 | protein_coding | ||
|
ENSG00000108604 (SMARCD2) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 |
ENST00000225742 (SMARCD2-002)
|
63832604-63842466 | protein_coding | |
|
ENST00000323347 (SMARCD2-003)
|
63832502-63838728 | protein_coding | ||
|
ENST00000448276 (SMARCD2-001)
|
63832084-63842940 | protein_coding | ||
|
ENST00000450364 (SMARCD2-012)
|
63832639-63834744 | protein_coding | ||
|
ENST00000577686 (SMARCD2-008)
|
63836746-63842510 | retained_intron | ||
|
ENST00000577990 (SMARCD2-005)
|
63842466-63843065 | protein_coding | ||
|
ENST00000578234 (SMARCD2-009)
|
63834178-63835657 | retained_intron | ||
|
ENST00000580054 (SMARCD2-007)
|
63835491-63837625 | nonsense_mediated_decay | ||
|
ENST00000581832 (SMARCD2-011)
|
63834362-63835052 | retained_intron | ||
|
ENST00000584400 (SMARCD2-006)
|
63833912-63842698 | nonsense_mediated_decay | ||
|
ENST00000584483 (SMARCD2-010)
|
63833705-63835145 | retained_intron | ||
|
ENST00000613943 (SMARCD2-201)
|
63832081-63842674 | protein_coding | ||
| CIL_0006QA_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000020708-ENSMUSG00000078619 | CGP | 10090 | 11:106256154-106272972 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000020708 (Psmc5) protease (prosome, macropain) 26S subunit, ATPase 5 |
ENSMUST00000021049 (Psmc5-001)
|
106256154-106263120 | protein_coding | |
|
ENSMUST00000133131 (Psmc5-002)
|
106256154-106263120 | nonsense_mediated_decay | ||
|
ENSMUSG00000065162 (Gm23645) predicted gene, 23645 |
ENSMUST00000083228 (Gm23645-201)
|
106260206-106260313 | snRNA | |
|
ENSMUSG00000078619 (Smarcd2) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 |
ENSMUST00000021052 (Smarcd2-001)
|
106263179-106272972 | protein_coding | |
|
ENSMUST00000106841 (Smarcd2-006)
|
106263799-106264936 | retained_intron | ||
|
ENSMUST00000106843 (Smarcd2-002)
|
106263179-106267799 | protein_coding | ||
|
ENSMUST00000132278 (Smarcd2-004)
|
106264733-106266071 | retained_intron | ||
|
ENSMUST00000140255 (Smarcd2-009)
|
106264019-106265746 | protein_coding | ||
|
ENSMUST00000155243 (Smarcd2-003)
|
106265312-106272965 | processed_transcript | ||
|
ENSMUST00000155514 (Smarcd2-005)
|
106263714-106265662 | retained_intron | ||
|
ENSMUST00000174017 (Smarcd2-008)
|
106266891-106267528 | retained_intron | ||
|
ENSMUST00000174253 (Smarcd2-007)
|
106265739-106267483 | processed_transcript | ||
Expression Patterns
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