C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DEAD (Asp-Glu-Ala-Asp) box helicase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579461 DDX5-029 ENSG00000108654 9606 - 17:64501876-64503246 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012I CIL_00012I_0001 CGP 17:64477785-64508199
CIL_00012F CIL_00012F_0001 CGP 17:64499616-64542461

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133426 Ddx5-002 nonsense_mediated_decay Mus_musculus 0 532
ENSMUST00000021062 Ddx5-001 protein_coding Mus_musculus 0 532
ENSMUST00000120566 Gm12183-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000106778 Ddx5-006 retained_intron Mus_musculus 0 435
ENSMUST00000119755 Gm12067-001 processed_pseudogene Mus_musculus 1e-21 108

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