C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106778 Ddx5-006 ENSMUSG00000020719 10090 - 11:106783733-106785046 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000106778
Transcript ID Ovary Placenta Testis
ENSMUST00000106778 309.197±0.00 164.031±43.85 646.532±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012I CIL_00012I_0002 CGP 11:106768253-106789185
CIL_00012F CIL_00012F_0002 CGP 11:106780355-106819930

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225792 DDX5-001 protein_coding Homo_sapiens 0 523
ENST00000450599 DDX5-006 protein_coding Homo_sapiens 0 523
ENST00000540698 DDX5-003 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000577787 DDX5-019 protein_coding Homo_sapiens 0 261
ENST00000578491 DDX5-023 processed_transcript Homo_sapiens 0 523
ENST00000578758 DDX5-030 retained_intron Homo_sapiens 9e-22 108
ENST00000578804 DDX5-005 protein_coding Homo_sapiens 0 523
ENST00000579461 DDX5-029 retained_intron Homo_sapiens 0 435
ENST00000579996 DDX5-007 protein_coding Homo_sapiens 0 435
ENST00000580026 DDX5-031 processed_transcript Homo_sapiens 0 209
ENST00000581230 DDX5-002 retained_intron Homo_sapiens 0 523
ENST00000581551 DDX5-022 retained_intron Homo_sapiens 0 261
ENST00000581693 DDX5-004 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000582326 DDX5-020 retained_intron Homo_sapiens 0 252
ENST00000583201 DDX5-021 retained_intron Homo_sapiens 0 261
ENST00000583894 DDX5-017 retained_intron Homo_sapiens 0 204
ENST00000584549 DDX5-018 retained_intron Homo_sapiens 0 261
ENST00000585317 DDX5-024 retained_intron Homo_sapiens 0 300

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