C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: musashi RNA-binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579483 MSI2-004 ENSG00000153944 9606 + 17:57262115-57268550 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLungMuscleOvaryENST00000579483
Transcript ID Bladder Colon Lung Muscle Ovary
ENST00000579483 4.502±0.00 2.193±0.00 1.208±0.00 0.997±0.00 4.474±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000880 CIL_000880_0001 VISTA 17:57137969-57739404
CIL_0008GV CIL_0008GV_0001 VISTA 17:57172762-57775247
CIL_0007R8 CIL_0007R8_0001 VISTA 17:57241317-57842812

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107908 Msi2-005 protein_coding Mus_musculus 0.0000000003 73
ENSMUST00000144699 Msi2-003 protein_coding Mus_musculus 0.0000000009 71
ENSMUST00000138790 Msi2-002 retained_intron Mus_musculus 0.0000000009 71
ENSMUST00000092794 Msi2-006 protein_coding Mus_musculus 0.0000000009 71
ENSMUST00000107909 Msi2-001 protein_coding Mus_musculus 0.0000000009 71
ENSMUST00000126293 Msi2-004 processed_transcript Mus_musculus 0.000000003 69

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