C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | serine hydroxymethyltransferase 1 (soluble) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000579558  |
SHMT1-008 |
ENSG00000176974 |
9606 | - |
17:18340405-18363501  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00058O | CIL_00058O_0002 | CGP | 17:18315310-18363563 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000173260
|
Shmt1-004 | retained_intron | Mus_musculus | 0 | 656 |
|
ENSMUST00000174214
|
Shmt1-010 | protein_coding | Mus_musculus | 0 | 656 |
|
ENSMUST00000174719
|
Shmt1-006 | protein_coding | Mus_musculus | 0 | 656 |
|
ENSMUST00000018744
|
Shmt1-001 | protein_coding | Mus_musculus | 0 | 656 |
|
ENSMUST00000173698
|
Shmt1-008 | processed_transcript | Mus_musculus | 0 | 327 |
|
ENSMUST00000174174
|
Shmt1-007 | nonsense_mediated_decay | Mus_musculus | 0 | 327 |
|
ENSDART00000132225
|
shmt1-002 | protein_coding | Danio_rerio | 0 | 285 |
|
ENSDART00000141578
|
shmt1-003 | protein_coding | Danio_rerio | 0 | 285 |
|
ENSDART00000074737
|
shmt1-001 | protein_coding | Danio_rerio | 0 | 285 |
|
ENSMUST00000174093
|
Shmt1-005 | processed_transcript | Mus_musculus | 5e-26 | 122 |
