| Transcript ID | Brain | Colon | Placenta |
|---|---|---|---|
| ENSMUST00000102605 | 1.183±0.00 | 0.916±0.00 | 1.404±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | period circadian clock 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000102605  |
Per1-002 |
ENSMUSG00000020893 |
10090 | + |
11:69100522-69109960  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000122 | IDA | negative regulation of transcription from RNA polymerase II promoter |
| GO:0004871 | IEA | signal transducer activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0007165 | IEA | signal transduction |
| GO:0007623 | TAS | circadian rhythm |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000079459
|
per1a-201 | protein_coding | Danio_rerio | 0.00000001 | 68 |
|
ENSDART00000100468
|
per1a-001 | protein_coding | Danio_rerio | 0.00000001 | 68 |
|
ENST00000254657
|
PER2-001 | protein_coding | Homo_sapiens | 2e-16 | 94 |
|
ENST00000317276
|
PER1-001 | protein_coding | Homo_sapiens | 0 | 3954 |
|
ENST00000354903
|
PER1-002 | protein_coding | Homo_sapiens | 0 | 2189 |
|
ENST00000577253
|
PER1-008 | protein_coding | Homo_sapiens | 0 | 385 |
|
ENST00000577424
|
PER1-013 | retained_intron | Homo_sapiens | 8e-27 | 124 |
|
ENST00000578089
|
PER1-015 | processed_transcript | Homo_sapiens | 0 | 418 |
|
ENST00000578223
|
PER1-011 | retained_intron | Homo_sapiens | 0 | 693 |
|
ENST00000578950
|
PER1-018 | retained_intron | Homo_sapiens | 0 | 342 |
|
ENST00000579065
|
PER1-004 | retained_intron | Homo_sapiens | 0 | 876 |
|
ENST00000581082
|
PER1-005 | protein_coding | Homo_sapiens | 0 | 4865 |
|
ENST00000581395
|
PER1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1170 |
|
ENST00000581703
|
PER1-009 | protein_coding | Homo_sapiens | 0 | 592 |
|
ENST00000582719
|
PER1-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 2189 |
|
ENST00000583559
|
PER1-016 | protein_coding | Homo_sapiens | 0 | 427 |
|
ENST00000583677
|
PER1-007 | retained_intron | Homo_sapiens | 0 | 348 |
|
ENST00000584202
|
PER1-010 | protein_coding | Homo_sapiens | 0 | 479 |
|
ENST00000585095
|
PER1-014 | retained_intron | Homo_sapiens | 0 | 219 |
|
ENST00000585284
|
PER1-019 | retained_intron | Homo_sapiens | 0 | 597 |
