C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alveolar soft part sarcoma chromosome region, candidate 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000582355 ASPSCR1-014 ENSG00000169696 9606 + 17:81995443-82017037 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000582355
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000582355 5.799±0.00 6.541±0.00 1.379±0.00 5.636±5.15 2.484±1.53 1.992±0.00 0.259±0.00 3.261±0.00 4.017±2.71 5.758±0.00 15.264±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VL CIL_0004VL_0001 CGP 17:81952507-82017406
CIL_0004VS CIL_0004VS_0001 CGP 17:81976807-82024107

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106159 Aspscr1-202 protein_coding Mus_musculus 0 621
ENSMUST00000103016 Aspscr1-002 protein_coding Mus_musculus 0 621
ENSMUST00000026135 Aspscr1-001 protein_coding Mus_musculus 0 621
ENSMUST00000106158 Aspscr1-201 protein_coding Mus_musculus 0 344
ENSMUST00000106160 Aspscr1-009 protein_coding Mus_musculus 0 344
ENSMUST00000167678 Aspscr1-019 protein_coding Mus_musculus 0 342
ENSMUST00000166838 Aspscr1-008 nonsense_mediated_decay Mus_musculus 0 342
ENSMUST00000168097 Aspscr1-022 nonsense_mediated_decay Mus_musculus 0 257

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