C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alveolar soft part sarcoma chromosome region, candidate 1 (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166838 Aspscr1-008 ENSMUSG00000025142 10090 + 11:120689274-120709443 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENSMUST00000166838
Transcript ID Brain Placenta
ENSMUST00000166838 9.314±0.00 15.890±4.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VL CIL_0004VL_0002 CGP 11:120653788-120709447
CIL_0004VS CIL_0004VS_0002 CGP 11:120672973-120713738

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306729 ASPSCR1-002 protein_coding Homo_sapiens 0 342
ENST00000306739 ASPSCR1-001 protein_coding Homo_sapiens 0 342
ENST00000577733 ASPSCR1-005 retained_intron Homo_sapiens 0 342
ENST00000578236 ASPSCR1-006 retained_intron Homo_sapiens 0 342
ENST00000580534 ASPSCR1-003 protein_coding Homo_sapiens 0 342
ENST00000581608 ASPSCR1-007 retained_intron Homo_sapiens 0 342
ENST00000582355 ASPSCR1-014 protein_coding Homo_sapiens 0 342
ENST00000583503 ASPSCR1-015 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000584454 ASPSCR1-004 nonsense_mediated_decay Homo_sapiens 0 252

Loading