C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin 85kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000583070 NUP85-016 ENSG00000125450 9606 + 17:75225391-75235152 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverPlacentaENST00000583070
Transcript ID Adipose Bladder Brain Colon Kidney Liver Placenta
ENST00000583070 5.632±0.00 0.542±0.00 4.576±0.00 7.226±0.00 7.989±7.03 3.459±0.00 7.308±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0007IA CIL_0007IA_0001 CGP 17:75165586-75235758
CIL_0007IW CIL_0007IW_0001 CGP 17:75205659-75262363

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021085 Nup85-001 protein_coding Mus_musculus 0 989
ENSMUST00000140986 Nup85-002 protein_coding Mus_musculus 0 765

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