C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 45
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000583151 NPM1P45-001 ENSG00000265593 9606 - 17:9852748-9853306 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENST00000583151
Transcript ID Brain Muscle
ENST00000583151 0.023±0.00 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HG CIL_0000HG_0001 CGP 17:9822206-9905621

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101375 Npm1-003 protein_coding Mus_musculus 0 444
ENSMUST00000109354 Npm1-002 protein_coding Mus_musculus 0 444
ENSMUST00000093201 Npm1-006 protein_coding Mus_musculus 0 444
ENSMUST00000075641 Npm1-001 protein_coding Mus_musculus 0 444
ENSMUST00000118871 Gm15484-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000120677 Gm12583-001 processed_pseudogene Mus_musculus 0 311
ENSMUST00000164523 Gm5611-201 protein_coding Mus_musculus 0 283
ENSMUST00000117205 Gm13423-001 processed_pseudogene Mus_musculus 0 220

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