C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alveolar soft part sarcoma chromosome region, candidate 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000584454 ASPSCR1-004 ENSG00000169696 9606 + 17:81978186-82017406 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000584454
Transcript ID Breast
ENST00000584454 0.297±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VL CIL_0004VL_0001 CGP 17:81952507-82017406
CIL_0004VS CIL_0004VS_0001 CGP 17:81976807-82024107

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131727 Aspscr1-007 protein_coding Mus_musculus 0 438
ENSMUST00000106158 Aspscr1-201 protein_coding Mus_musculus 0 435
ENSMUST00000026135 Aspscr1-001 protein_coding Mus_musculus 0 435
ENSMUST00000149389 Aspscr1-003 protein_coding Mus_musculus 0 433
ENSMUST00000135346 Aspscr1-004 protein_coding Mus_musculus 0 433
ENSMUST00000106159 Aspscr1-202 protein_coding Mus_musculus 0 374
ENSMUST00000151160 Aspscr1-011 protein_coding Mus_musculus 0 374
ENSMUST00000106160 Aspscr1-009 protein_coding Mus_musculus 0 374
ENSMUST00000103016 Aspscr1-002 protein_coding Mus_musculus 0 374
ENSMUST00000168714 Aspscr1-018 protein_coding Mus_musculus 0 370
ENSMUST00000153346 Aspscr1-006 protein_coding Mus_musculus 0 366
ENSMUST00000143844 Aspscr1-017 nonsense_mediated_decay Mus_musculus 0 342
ENSMUST00000168097 Aspscr1-022 nonsense_mediated_decay Mus_musculus 0 333
ENSMUST00000167678 Aspscr1-019 protein_coding Mus_musculus 0 252
ENSMUST00000166838 Aspscr1-008 nonsense_mediated_decay Mus_musculus 0 252
ENSMUST00000127269 Aspscr1-005 protein_coding Mus_musculus 0 248
ENSMUST00000129644 Aspscr1-010 protein_coding Mus_musculus 4.06377e-44 183

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