C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | proteasome (prosome, macropain) 26S subunit, ATPase, 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000584880  |
PSMC5-016 |
ENSG00000087191 |
9606 | + |
17:63830386-63831553  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B9 | CIL_0009B9_0001 | VISTA | 17:63374232-63977730 |
| CIL_0006Q4 | CIL_0006Q4_0001 | CGP | 17:63773603-63830012 |
| CIL_0006Q9 | CIL_0006Q9_0001 | CGP | 17:63819433-63832026 |
| CIL_0006QA | CIL_0006QA_0001 | CGP | 17:63827152-63843065 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005524 | IEA | ATP binding |
| GO:0006281 | IEA | DNA repair |
| GO:0006310 | IEA | DNA recombination |
| GO:0009378 | IEA | four-way junction helicase activity |
| GO:0016887 | IEA | ATPase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000021049
|
Psmc5-001 | protein_coding | Mus_musculus | 0 | 712 |
|
ENSMUST00000133131
|
Psmc5-002 | nonsense_mediated_decay | Mus_musculus | 0 | 654 |
|
ENSDART00000106191
|
psmc5-001 | protein_coding | Danio_rerio | 0 | 457 |
