C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006Q4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198231-ENSG00000108592 CGP 9606 17:63773603-63830012
GeneTranscriptPositionBiotype
ENSG00000087191 (PSMC5)
proteasome (prosome, macropain) 26S subunit, ATPase, 5 		ENST00000310144 (PSMC5-001) 63827183-63832019 protein_coding
ENST00000375812 (PSMC5-201) 63827684-63832026 protein_coding
ENST00000578570 (PSMC5-005) 63827490-63832018 retained_intron
ENST00000579031 (PSMC5-014) 63830065-63831424 retained_intron
ENST00000579147 (PSMC5-003) 63827460-63832019 retained_intron
ENST00000579708 (PSMC5-008) 63827152-63830917 protein_coding
ENST00000580063 (PSMC5-015) 63830682-63831523 retained_intron
ENST00000580265 (PSMC5-009) 63827703-63828562 retained_intron
ENST00000580864 (PSMC5-004) 63827460-63832019 protein_coding
ENST00000581764 (PSMC5-002) 63827460-63831118 retained_intron
ENST00000581842 (PSMC5-018) 63827446-63830925 protein_coding
ENST00000581882 (PSMC5-006) 63827878-63831986 protein_coding
ENST00000582130 (PSMC5-011) 63827453-63831203 protein_coding
ENST00000582420 (PSMC5-010) 63827433-63827922 processed_transcript
ENST00000583283 (PSMC5-012) 63827460-63829540 retained_intron
ENST00000584320 (PSMC5-020) 63827455-63831105 protein_coding
ENST00000584536 (PSMC5-013) 63827472-63831425 nonsense_mediated_decay
ENST00000584657 (PSMC5-017) 63831339-63832019 retained_intron
ENST00000584880 (PSMC5-016) 63830386-63831553 nonsense_mediated_decay
ENST00000585123 (PSMC5-019) 63827460-63831151 protein_coding
ENST00000585242 (PSMC5-007) 63827479-63831984 nonsense_mediated_decay
ENSG00000108588 (CCDC47)
coiled-coil domain containing 47 		ENST00000225726 (CCDC47-001) 63745250-63773775 protein_coding
ENST00000403162 (CCDC47-002) 63746403-63773570 protein_coding
ENST00000580986 (CCDC47-005) 63766119-63776351 protein_coding
ENST00000582252 (CCDC47-003) 63751770-63773570 protein_coding
ENST00000582331 (CCDC47-006) 63752780-63761537 retained_intron
ENST00000584112 (CCDC47-007) 63765760-63773564 retained_intron
ENST00000612558 (CCDC47-201) 63746427-63764793 protein_coding
ENSG00000108592 (FTSJ3)
FtsJ homolog 3 (E. coli) 		ENST00000427159 (FTSJ3-001) 63819433-63827671 protein_coding
ENST00000577263 (FTSJ3-008) 63825831-63827098 retained_intron
ENST00000579569 (FTSJ3-007) 63825343-63826910 nonsense_mediated_decay
ENST00000579831 (FTSJ3-012) 63821429-63823891 nonsense_mediated_decay
ENST00000580129 (FTSJ3-011) 63824084-63824595 retained_intron
ENST00000580272 (FTSJ3-017) 63825384-63827064 protein_coding
ENST00000580290 (FTSJ3-009) 63825927-63827070 retained_intron
ENST00000580295 (FTSJ3-016) 63827115-63830012 processed_transcript
ENST00000580376 (FTSJ3-018) 63823590-63824386 retained_intron
ENST00000581209 (FTSJ3-015) 63825591-63827329 protein_coding
ENST00000582476 (FTSJ3-006) 63826072-63827106 retained_intron
ENST00000583202 (FTSJ3-014) 63820259-63822023 retained_intron
ENST00000583901 (FTSJ3-013) 63820915-63822189 retained_intron
ENST00000584193 (FTSJ3-010) 63825343-63826930 nonsense_mediated_decay
ENST00000584574 (FTSJ3-005) 63826639-63827647 protein_coding
ENST00000585145 (FTSJ3-004) 63826845-63827647 protein_coding
ENSG00000198231 (DDX42)
DEAD (Asp-Glu-Ala-Asp) box helicase 42 		ENST00000359353 (DDX42-010) 63774190-63818398 protein_coding
ENST00000389924 (DDX42-201) 63774189-63819316 protein_coding
ENST00000457800 (DDX42-202) 63792531-63819246 protein_coding
ENST00000577940 (DDX42-006) 63792529-63813290 nonsense_mediated_decay
ENST00000577978 (DDX42-015) 63800177-63806542 retained_intron
ENST00000578137 (DDX42-012) 63787038-63805287 nonsense_mediated_decay
ENST00000578593 (DDX42-005) 63811281-63819247 retained_intron
ENST00000578681 (DDX42-001) 63773863-63819317 protein_coding
ENST00000579511 (DDX42-014) 63800151-63806556 retained_intron
ENST00000579539 (DDX42-017) 63816589-63817886 retained_intron
ENST00000580108 (DDX42-011) 63787036-63798196 retained_intron
ENST00000581135 (DDX42-009) 63773603-63792504 protein_coding
ENST00000581477 (DDX42-004) 63810263-63811271 retained_intron
ENST00000581767 (DDX42-008) 63817073-63819316 retained_intron
ENST00000582985 (DDX42-018) 63816968-63819099 processed_transcript
ENST00000583590 (DDX42-002) 63773884-63819317 protein_coding
ENST00000584010 (DDX42-003) 63805508-63819209 retained_intron
ENST00000584261 (DDX42-013) 63792486-63806650 nonsense_mediated_decay
ENST00000584951 (DDX42-016) 63813272-63815970 retained_intron
CIL_0006Q4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020705-ENSMUSG00000020706 CGP 10090 11:106216926-106256079
GeneTranscriptPositionBiotype
ENSMUSG00000020705 (Ddx42)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 		ENSMUST00000021046 (Ddx42-001) 106216926-106249139 protein_coding
ENSMUST00000152860 (Ddx42-002) 106236996-106238824 processed_transcript
ENSMUSG00000020706 (Ftsj3)
FtsJ homolog 3 (E. coli) 		ENSMUST00000021048 (Ftsj3-001) 106249142-106256079 protein_coding
ENSMUST00000126938 (Ftsj3-006) 106249899-106250698 retained_intron
ENSMUST00000127803 (Ftsj3-004) 106253376-106253995 retained_intron
ENSMUST00000143729 (Ftsj3-003) 106254292-106255796 retained_intron
ENSMUST00000143884 (Ftsj3-002) 106254863-106255804 retained_intron
ENSMUST00000154635 (Ftsj3-005) 106251009-106252554 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Q4_0001ENSG00000087191ENST00000310144ENST00000375812ENST00000578570ENST00000579147ENST00000580864ENST00000581842ENST00000581882ENST00000582130ENST00000585123ENST00000585242ENSG00000108588ENST00000225726ENST00000403162ENST00000582252ENST00000612558ENSG00000108592ENST00000427159ENSG00000198231ENST00000359353ENST00000389924ENST00000457800ENST00000577940ENST00000583590CIL_0006Q4_0002ENSMUSG00000020705ENSMUST00000021046ENSMUSG00000020706ENSMUST00000021048ENSMUST00000143729
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000087191 ENST00000310144 N/A N/A N/A N/A N/A N/A 1.426±0.00 N/A N/A N/A N/A 53.642±0.00 30.565±18.59 N/A
ENST00000375812 21.408±0.00 N/A N/A 45.885±0.00 13.462±0.00 42.850±0.00 N/A 23.267±17.15 N/A 9.423±6.94 N/A 32.020±1.60 35.463±5.76 34.399±0.00
ENST00000578570 N/A N/A N/A N/A N/A 2.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579147 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.283±0.00 N/A N/A N/A N/A
ENST00000579708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580864 23.933±0.00 44.526±0.00 N/A N/A 15.118±0.00 N/A N/A N/A N/A 10.105±0.00 N/A N/A N/A 26.806±0.00
ENST00000581764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581842 N/A N/A 4.198±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.453±0.00 N/A 65.613±0.00
ENST00000582130 N/A N/A N/A N/A N/A 4.339±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.555±0.00 N/A
ENST00000585242 46.442±0.00 55.811±0.00 N/A 70.643±0.00 19.267±16.88 N/A N/A 69.223±0.00 26.092±0.00 22.011±0.00 24.829±19.47 32.866±25.52 36.092±9.02 74.419±7.80
ENSG00000108588 ENST00000225726 18.076±0.00 22.971±0.00 N/A 17.159±8.89 11.933±7.72 12.958±7.95 5.157±3.15 16.624±8.63 10.062±5.32 13.335±6.60 7.165±0.00 21.323±9.39 23.511±6.33 25.650±1.55
ENST00000403162 N/A N/A N/A N/A N/A N/A 11.795±0.00 N/A N/A N/A 19.637±0.00 N/A N/A N/A
ENST00000580986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582252 N/A N/A 9.069±0.00 N/A 7.152±0.00 N/A 3.423±0.00 8.789±0.00 9.592±0.00 11.059±0.00 N/A N/A N/A N/A
ENST00000582331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612558 N/A N/A 13.534±0.00 19.434±4.50 13.976±0.00 14.806±0.54 10.783±5.59 20.565±0.46 11.803±0.90 16.193±0.53 15.030±7.43 15.278±0.00 17.549±0.00 N/A
ENSG00000108592 ENST00000427159 17.116±0.00 16.721±0.00 N/A 6.113±4.34 6.633±4.92 11.492±9.03 5.324±0.00 11.414±8.29 5.681±1.43 3.837±1.59 9.122±7.89 21.997±2.18 12.474±2.48 19.233±1.00
ENST00000577263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198231 ENST00000359353 N/A N/A N/A N/A N/A 6.455±0.00 N/A N/A N/A N/A N/A 23.072±0.00 28.435±0.00 39.098±0.00
ENST00000389924 20.067±0.00 17.560±0.00 N/A 23.552±0.00 11.643±7.45 6.716±2.10 7.822±6.18 6.375±2.01 5.258±0.89 11.524±0.00 9.535±5.35 18.215±8.91 16.244±3.72 22.707±3.91
ENST00000457800 18.588±0.00 27.391±0.00 N/A 24.292±0.00 20.956±0.00 13.987±0.00 1.900±0.00 15.674±0.00 6.212±0.00 11.653±0.00 7.529±0.00 23.573±1.08 9.650±0.00 28.677±0.00
ENST00000577940 N/A N/A 13.620±0.00 N/A 11.130±0.00 11.226±0.00 N/A N/A 11.916±0.00 17.813±0.00 7.675±0.00 16.533±0.00 N/A N/A
ENST00000577978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583590 N/A N/A N/A 5.328±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020705 ENSMUST00000021046 6.804±2.22 10.349±4.83 13.054±2.95 23.466±3.93 7.982±1.10 7.712±0.70 4.126±0.85 6.556±0.36 9.694±6.05 8.788±3.14 6.694±0.43 13.269±7.61 18.561±2.86 11.627±4.85
ENSMUST00000152860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020706 ENSMUST00000021048 7.983±1.59 4.076±1.02 9.796±0.32 13.069±6.50 4.790±1.40 2.969±0.44 3.483±0.34 4.464±0.84 12.554±8.84 3.954±0.58 8.072±0.77 14.255±17.37 32.500±22.94 15.073±14.47
ENSMUST00000126938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143729 11.737±2.16 10.411±1.97 N/A N/A 5.695±0.83 3.762±1.11 N/A 3.388±0.52 3.599±0.00 3.191±0.00 N/A 9.009±1.59 N/A N/A
ENSMUST00000143884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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