C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquinol-cytochrome c reductase, complex III subunit XI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000585937 UQCR11-001 ENSG00000267059 9606 - 19:1578339-1605445 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverLungPlacentaTestisENST00000585937
Transcript ID Bladder Breast Colon Heart Liver Lung Placenta Testis
ENST00000585937 0.641±0.00 2.576±0.00 4.274±0.00 2.298±0.00 1.478±0.00 1.659±0.00 35.688±0.00 14.409±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YO CIL_0003YO_0001 CGP 19:1554669-1592801
CIL_0003Z8 CIL_0003Z8_0001 CGP 19:1573596-1605445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005743 TAS mitochondrial inner membrane
GO:0006091 TAS generation of precursor metabolites and energy
GO:0008121 IEA ubiquinol-cytochrome-c reductase activity
GO:0009055 TAS:IEA electron carrier activity
GO:0016021 IEA integral component of membrane
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0070469 IEA respiratory chain
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105347 Mbd3-006 protein_coding Mus_musculus 0 845
ENSMUST00000105349 Mbd3-002 protein_coding Mus_musculus 0 845
ENSMUST00000092295 Mbd3-001 protein_coding Mus_musculus 0 845
ENSMUST00000105348 Mbd3-003 protein_coding Mus_musculus 0 645
ENSMUST00000142997 Mbd3-004 protein_coding Mus_musculus 0 603
ENSMUST00000125618 Mbd3-005 processed_transcript Mus_musculus 0 453

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