C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methyl-CpG binding domain protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142997 Mbd3-004 ENSMUSG00000035478 10090 - 10:80392539-80395170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142997 14.935±3.07 18.535±1.70 10.948±2.21 27.443±5.37 15.680±6.56 17.076±1.78 7.384±1.73 11.967±1.35 9.558±3.24 15.048±0.42 9.198±0.00 30.603±8.30 21.782±12.90 7.656±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YO CIL_0003YO_0002 CGP 10:80380355-80399550
CIL_0003Z8 CIL_0003Z8_0002 CGP 10:80392539-80406830

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000156825 MBD3-002 protein_coding Homo_sapiens 0 603
ENST00000434436 MBD3-001 protein_coding Homo_sapiens 0 603
ENST00000585937 UQCR11-001 nonsense_mediated_decay Homo_sapiens 0 603
ENST00000585967 MBD3-004 protein_coding Homo_sapiens 0 351
ENST00000589064 MBD3-010 processed_transcript Homo_sapiens 0 577
ENST00000590550 MBD3-009 protein_coding Homo_sapiens 0 603
ENST00000590830 MBD3-008 retained_intron Homo_sapiens 0 603
ENST00000592012 MBD3-007 nonsense_mediated_decay Homo_sapiens 0 577
ENST00000592361 MBD3-005 protein_coding Homo_sapiens 0 296

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