C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003Z8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000071655-ENSG00000267059 CGP 9606 19:1573596-1605445
GeneTranscriptPositionBiotype
ENSG00000071655 (MBD3)
methyl-CpG binding domain protein 3 		ENST00000156825 (MBD3-002) 1573596-1592801 protein_coding
ENST00000434436 (MBD3-001) 1576678-1592708 protein_coding
ENST00000585903 (MBD3-006) 1581108-1584573 nonsense_mediated_decay
ENST00000585967 (MBD3-004) 1581159-1592359 protein_coding
ENST00000589064 (MBD3-010) 1577746-1585333 processed_transcript
ENST00000589901 (MBD3-011) 1578445-1581737 retained_intron
ENST00000590550 (MBD3-009) 1576640-1585530 protein_coding
ENST00000590830 (MBD3-008) 1578012-1584954 retained_intron
ENST00000592012 (MBD3-007) 1576640-1585307 nonsense_mediated_decay
ENST00000592361 (MBD3-005) 1581210-1586362 protein_coding
ENST00000592965 (MBD3-003) 1585055-1592392 protein_coding
ENSG00000267059 (UQCR11)
ubiquinol-cytochrome c reductase, complex III subunit XI 		ENST00000585937 (UQCR11-001) 1578339-1605445 nonsense_mediated_decay

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003Z8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035478-ENSMUSG00000020163 CGP 10090 10:80392539-80406830
GeneTranscriptPositionBiotype
ENSMUSG00000020163 (Uqcr11)
ubiquinol-cytochrome c reductase, complex III subunit XI 		ENSMUST00000020372 (Uqcr11-001) 80402997-80406830 protein_coding
ENSMUST00000138428 (Uqcr11-003) 80402997-80406766 processed_transcript
ENSMUST00000141683 (Uqcr11-002) 80402998-80406795 processed_transcript
ENSMUSG00000035478 (Mbd3)
methyl-CpG binding domain protein 3 		ENSMUST00000092295 (Mbd3-001) 80392539-80399550 protein_coding
ENSMUST00000105347 (Mbd3-006) 80392982-80395719 protein_coding
ENSMUST00000105348 (Mbd3-003) 80392839-80399422 protein_coding
ENSMUST00000105349 (Mbd3-002) 80392539-80399550 protein_coding
ENSMUST00000125618 (Mbd3-005) 80393895-80395326 processed_transcript
ENSMUST00000142997 (Mbd3-004) 80392539-80395170 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Z8_0001ENSG00000071655ENST00000156825ENST00000434436ENST00000585903ENST00000585967ENST00000589064ENST00000589901ENST00000590550ENST00000590830ENST00000592012ENST00000592361ENST00000592965ENSG00000267059ENST00000585937CIL_0003Z8_0002ENSMUSG00000020163ENSMUST00000020372ENSMUST00000138428ENSMUST00000141683ENSMUSG00000035478ENSMUST00000092295ENSMUST00000105347ENSMUST00000105348ENSMUST00000105349ENSMUST00000125618ENSMUST00000142997
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Z8_0001ENSG00000071655ENST00000156825ENST00000434436ENST00000590830ENST00000592012ENSG00000267059ENST00000585937CIL_0003Z8_0002ENSMUSG00000020163ENSMUST00000020372ENSMUSG00000035478ENSMUST00000092295ENSMUST00000105347ENSMUST00000105349ENSMUST00000125618ENSMUST00000142997
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071655 ENST00000156825 N/A N/A 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.994±3.74 N/A N/A
ENST00000434436 21.704±0.00 29.709±0.00 N/A 11.603±8.90 46.506±0.00 25.443±0.00 N/A 12.354±10.67 12.139±10.93 19.371±0.00 11.262±0.00 31.031±22.36 42.988±17.15 29.017±9.79
ENST00000585903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590830 N/A N/A 0.923±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592012 11.163±0.00 16.665±0.00 0.347±0.00 N/A 0.973±0.00 N/A N/A N/A N/A N/A N/A 1.271±0.00 N/A 8.928±0.00
ENST00000592361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267059 ENST00000585937 N/A N/A 0.641±0.00 N/A 2.576±0.00 4.274±0.00 2.298±0.00 N/A 1.478±0.00 1.659±0.00 N/A N/A 35.688±0.00 14.409±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020163 ENSMUST00000020372 1054.928±157.10 1398.805±156.36 232.173±123.61 182.606±70.40 790.563±422.05 1100.937±184.13 2177.173±370.35 1642.910±387.96 760.735±289.98 583.093±26.75 540.406±24.79 598.583±233.85 212.709±77.32 203.097±85.33
ENSMUST00000138428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035478 ENSMUST00000092295 10.633±1.74 16.496±3.16 9.671±2.98 14.138±1.42 11.965±0.67 8.433±2.12 7.241±1.55 10.455±2.73 9.399±3.16 8.391±1.43 20.554±4.56 13.553±3.58 11.026±2.70 10.365±1.79
ENSMUST00000105347 N/A N/A N/A 38.669±25.46 2.482±0.00 N/A 8.272±0.51 N/A 15.675±1.64 N/A N/A 30.837±13.55 35.552±8.70 30.796±13.24
ENSMUST00000105348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105349 38.700±13.12 26.560±7.12 25.048±6.69 60.361±8.24 28.698±10.44 22.852±3.23 17.584±3.63 39.061±3.91 23.421±11.02 24.846±8.07 23.181±4.66 34.915±11.75 28.075±8.44 33.949±4.47
ENSMUST00000125618 N/A N/A N/A 66.780±0.00 N/A N/A N/A N/A N/A N/A N/A 83.535±0.00 94.760±54.41 68.686±0.00
ENSMUST00000142997 14.935±3.07 18.535±1.70 10.948±2.21 27.443±5.37 15.680±6.56 17.076±1.78 7.384±1.73 11.967±1.35 9.558±3.24 15.048±0.42 9.198±0.00 30.603±8.30 21.782±12.90 7.656±0.00

Loading