C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SMAD family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586487 SMAD2-010 ENSG00000175387 9606 - 18:47869422-47895725 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008OV CIL_0008OV_0001 VISTA 18:47242733-47843421
CIL_0008IS CIL_0008IS_0001 VISTA 18:47260919-47861703
CIL_0008FI CIL_0008FI_0001 VISTA 18:47646469-48247329
CIL_0008EL CIL_0008EL_0001 VISTA 18:47706836-48309090

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025453 Smad2-002 protein_coding Mus_musculus 1.99965e-42 176
ENSMUST00000171256 Smad2-005 protein_coding Mus_musculus 1.99965e-42 176
ENSMUST00000168423 Smad2-001 protein_coding Mus_musculus 1.99965e-42 176
ENSDART00000128579 smad2-202 protein_coding Danio_rerio 1e-30 137
ENSDART00000044756 smad2-201 protein_coding Danio_rerio 1e-30 137
ENSDART00000143608 smad2-004 protein_coding Danio_rerio 1e-30 137
ENSDART00000147653 smad2-002 protein_coding Danio_rerio 1e-30 137
ENSDART00000121892 smad2-001 protein_coding Danio_rerio 1e-30 137

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