C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tRNA methyltransferase 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587633 TRMT1-015 ENSG00000104907 9606 - 19:13110186-13116027 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastENST00000587633
Transcript ID Bladder Breast
ENST00000587633 1.482±0.00 2.882±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0001 VISTA 19:12752697-13356541
CIL_0007ZV CIL_0007ZV_0001 VISTA 19:12767682-13372012

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000128022 Trmt1-014 processed_transcript Mus_musculus 3e-26 122
ENSMUST00000177286 Trmt1-027 processed_transcript Mus_musculus 3e-26 122
ENSMUST00000125370 Trmt1-018 protein_coding Mus_musculus 3e-26 122
ENSMUST00000077990 Trmt1-006 processed_transcript Mus_musculus 3e-26 122
ENSMUST00000109768 Trmt1-003 protein_coding Mus_musculus 3e-26 122
ENSMUST00000177084 Trmt1-007 protein_coding Mus_musculus 3e-26 122
ENSMUST00000109767 Trmt1-002 protein_coding Mus_musculus 3e-26 122
ENSMUST00000001974 Trmt1-001 protein_coding Mus_musculus 3e-26 122
ENSMUST00000177531 Trmt1-019 protein_coding Mus_musculus 3e-26 122

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