C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: notchless homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588019 NLE1-003 ENSG00000073536 9606 - 17:35132244-35137167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungMusclePlacentaENST00000588019
Transcript ID Breast Colon Liver Lung Muscle Placenta
ENST00000588019 2.179±0.00 2.174±0.00 0.920±0.00 0.767±0.00 2.614±0.00 2.005±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ES CIL_0006ES_0001 CGP 17:35092208-35130732
CIL_0003B9 CIL_0003B9_0001 CGP 17:35121579-35142315
CIL_0003K1 CIL_0003K1_0001 CGP 17:35128753-35189345

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103213 Nle1-001 protein_coding Mus_musculus 0 684
ENSMUST00000167196 Nle1-006 nonsense_mediated_decay Mus_musculus 0 329
ENSMUST00000140318 Nle1-004 retained_intron Mus_musculus 0 294
ENSMUST00000124109 Nle1-005 retained_intron Mus_musculus 1e-32 145

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