C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003K1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000073536-ENSG00000141161 CGP 9606 17:35128753-35189345
GeneTranscriptPositionBiotype
ENSG00000073536 (NLE1)
notchless homolog 1 (Drosophila) 		ENST00000360831 (NLE1-005) 35132071-35142303 protein_coding
ENST00000442241 (NLE1-001) 35131347-35142315 protein_coding
ENST00000586869 (NLE1-004) 35128753-35142284 protein_coding
ENST00000588019 (NLE1-003) 35132244-35137167 protein_coding
ENST00000588642 (NLE1-007) 35137053-35142297 nonsense_mediated_decay
ENST00000589367 (NLE1-002) 35136367-35142304 nonsense_mediated_decay
ENST00000593176 (NLE1-008) 35137024-35142233 processed_transcript
ENSG00000073598 (FNDC8)
fibronectin type III domain containing 8 		ENST00000158009 (FNDC8-001) 35121579-35130732 protein_coding
ENSG00000141161 (UNC45B)
unc-45 homolog B (C. elegans) 		ENST00000268876 (UNC45B-001) 35147817-35189345 protein_coding
ENST00000394570 (UNC45B-002) 35147841-35189337 protein_coding
ENST00000591048 (UNC45B-003) 35148264-35186559 protein_coding
ENSG00000267782 (RP11-799D4.3)
 ENST00000585646 (RP11-799D4.3-001) 35164243-35167012 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0003K1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020692-ENSMUSG00000018845 CGP 10090 11:82900768-82943403
GeneTranscriptPositionBiotype
ENSMUSG00000018844 (Fndc8)
fibronectin type III domain containing 8 		ENSMUST00000018988 (Fndc8-001) 82892124-82900801 protein_coding
ENSMUSG00000018845 (Unc45b)
unc-45 homolog B (C. elegans) 		ENSMUST00000018989 (Unc45b-201) 82911253-82943403 protein_coding
ENSMUST00000108160 (Unc45b-001) 82910550-82943403 protein_coding
ENSMUST00000125499 (Unc45b-002) 82928959-82929745 processed_transcript
ENSMUST00000142336 (Unc45b-003) 82933602-82937757 processed_transcript
ENSMUST00000164945 (Unc45b-202) 82911253-82943403 protein_coding
ENSMUSG00000020692 (Nle1)
notchless homolog 1 (Drosophila) 		ENSMUST00000103213 (Nle1-001) 82900768-82908411 protein_coding
ENSMUST00000124109 (Nle1-005) 82900772-82901816 retained_intron
ENSMUST00000126202 (Nle1-002) 82904792-82907687 nonsense_mediated_decay
ENSMUST00000140318 (Nle1-004) 82901739-82904268 retained_intron
ENSMUST00000147915 (Nle1-003) 82904922-82908342 retained_intron
ENSMUST00000167196 (Nle1-006) 82900780-82904289 nonsense_mediated_decay
ENSMUST00000170815 (Nle1-007) 82904106-82904636 retained_intron
ENSMUSG00000086327 (Slfn5os)
schlafen 5, opposite strand 		ENSMUST00000127074 (Slfn5os-001) 82942341-82960681 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003K1_0001ENSG00000073536ENST00000360831ENST00000442241ENST00000586869ENST00000588019ENST00000588642ENST00000589367ENST00000593176ENSG00000073598ENST00000158009ENSG00000141161ENST00000268876ENST00000394570ENST00000591048ENSG00000267782ENST00000585646CIL_0003K1_0002ENSMUSG00000018844ENSMUST00000018988ENSMUSG00000018845ENSMUST00000018989ENSMUST00000108160ENSMUST00000125499ENSMUST00000142336ENSMUST00000164945ENSMUSG00000020692ENSMUST00000103213ENSMUST00000124109ENSMUST00000126202ENSMUST00000140318ENSMUST00000147915ENSMUST00000167196ENSMUST00000170815ENSMUSG00000086327ENSMUST00000127074
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003K1_0001ENSG00000073536ENST00000360831ENST00000442241ENST00000586869ENST00000588019ENST00000588642ENST00000589367ENSG00000073598ENST00000158009ENSG00000141161ENST00000268876ENST00000394570ENST00000591048ENSG00000267782ENST00000585646CIL_0003K1_0002ENSMUSG00000018844ENSMUST00000018988ENSMUSG00000018845ENSMUST00000018989ENSMUSG00000020692ENSMUST00000103213ENSMUST00000126202ENSMUST00000140318ENSMUST00000147915ENSMUST00000167196ENSMUST00000170815ENSMUSG00000086327ENSMUST00000127074
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073536 ENST00000360831 1.671±0.00 N/A N/A N/A 1.564±0.00 1.238±0.99 0.154±0.03 0.272±0.00 1.343±0.00 1.364±0.00 1.971±0.00 3.466±0.48 2.356±0.79 N/A
ENST00000442241 1.892±0.00 3.774±0.00 0.031±0.00 1.177±0.48 2.496±0.00 1.627±0.00 0.344±0.00 2.214±0.00 1.214±0.00 0.812±0.00 2.486±0.00 2.937±1.41 2.420±0.90 N/A
ENST00000586869 N/A N/A N/A 1.130±0.00 N/A 0.622±0.00 0.066±0.00 0.108±0.00 0.351±0.00 0.151±0.00 N/A 1.527±0.22 N/A 1.352±0.00
ENST00000588019 N/A N/A N/A N/A 2.179±0.00 2.174±0.00 N/A N/A 0.920±0.00 0.767±0.00 2.614±0.00 N/A 2.005±0.00 N/A
ENST00000588642 N/A N/A 0.200±0.00 N/A N/A 1.043±0.00 0.862±0.00 1.379±0.00 N/A N/A 2.535±0.00 N/A N/A N/A
ENST00000589367 N/A N/A N/A N/A N/A N/A 0.304±0.00 N/A 1.650±0.00 N/A N/A 1.204±0.00 N/A N/A
ENST00000593176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000073598 ENST00000158009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.362±1.32
ENSG00000141161 ENST00000268876 N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A 0.001±0.00 N/A N/A N/A N/A N/A
ENST00000394570 N/A 0.053±0.00 N/A 0.013±0.00 0.623±0.00 N/A 4.319±0.31 0.028±0.00 0.050±0.05 0.118±0.07 7.371±1.45 0.017±0.00 0.131±0.07 0.158±0.08
ENST00000591048 N/A 0.033±0.00 0.019±0.00 N/A 0.467±0.31 N/A 10.828±6.49 0.019±0.00 N/A 0.439±0.15 17.890±8.93 0.030±0.02 0.063±0.01 0.836±0.36
ENSG00000267782 ENST00000585646 N/A N/A N/A 0.087±0.00 N/A N/A 0.167±0.00 N/A N/A N/A N/A N/A N/A 0.104±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018844 ENSMUST00000018988 2.582±0.34 N/A N/A N/A 1.017±0.00 N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 57.090±23.13
ENSMUSG00000018845 ENSMUST00000018989 3.795±0.12 N/A N/A 0.079±0.00 11.325±2.63 N/A 30.765±17.07 N/A 0.296±0.19 4.423±0.92 81.217±4.11 4.652±1.12 N/A 2.061±0.42
ENSMUST00000108160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020692 ENSMUST00000103213 8.922±2.00 13.611±0.64 5.842±1.33 14.334±3.99 11.437±3.61 11.420±1.34 3.721±0.69 4.259±0.37 9.113±6.77 6.974±0.55 4.343±0.96 19.512±8.37 4.408±3.51 N/A
ENSMUST00000124109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.433±0.00 N/A
ENSMUST00000140318 N/A N/A 2.496±0.00 N/A 3.605±0.40 N/A 1.284±0.00 1.148±0.00 1.338±0.18 3.538±0.79 1.002±0.17 9.505±0.00 N/A N/A
ENSMUST00000147915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.044±0.00 N/A
ENSMUST00000167196 N/A N/A N/A N/A N/A N/A N/A 2.283±0.37 N/A N/A 1.818±0.16 16.199±0.00 1.024±0.58 N/A
ENSMUST00000170815 N/A N/A N/A N/A 8.800±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086327 ENSMUST00000127074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.937±8.34

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