C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: notchless homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167196 Nle1-006 ENSMUSG00000020692 10090 - 11:82900780-82904289 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMuscleOvaryPlacentaENSMUST00000167196
Transcript ID Kidney Muscle Ovary Placenta
ENSMUST00000167196 2.283±0.37 1.818±0.16 16.199±0.00 1.024±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ES CIL_0006ES_0002 CGP 11:82876434-82900801
CIL_0003B9 CIL_0003B9_0002 CGP 11:82892124-82908411
CIL_0003K1 CIL_0003K1_0002 CGP 11:82900768-82943403

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360831 NLE1-005 protein_coding Homo_sapiens 0 527
ENST00000442241 NLE1-001 protein_coding Homo_sapiens 0 527
ENST00000586869 NLE1-004 protein_coding Homo_sapiens 0 527
ENST00000588019 NLE1-003 protein_coding Homo_sapiens 0 329

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