C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 4 homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588059 VPS4B-004 ENSG00000119541 9606 - 18:63393444-63422463 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000588059
Transcript ID Muscle
ENST00000588059 0.285±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000B7 CIL_0000B7_0002 CGP 18:63327726-63422483
CIL_00076J CIL_00076J_0001 CGP 18:63389190-63505085

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094646 Vps4b-001 protein_coding Mus_musculus 0 335
ENSMUST00000112736 Vps4b-002 protein_coding Mus_musculus 0 335

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