C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: notchless homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588642 NLE1-007 ENSG00000073536 9606 - 17:35137053-35142297 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartKidneyMuscleENST00000588642
Transcript ID Bladder Colon Heart Kidney Muscle
ENST00000588642 0.200±0.00 1.043±0.00 0.862±0.00 1.379±0.00 2.535±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ES CIL_0006ES_0001 CGP 17:35092208-35130732
CIL_0003B9 CIL_0003B9_0001 CGP 17:35121579-35142315
CIL_0003K1 CIL_0003K1_0001 CGP 17:35128753-35189345

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126202 Nle1-002 nonsense_mediated_decay Mus_musculus 0 503
ENSMUST00000103213 Nle1-001 protein_coding Mus_musculus 0 494
ENSMUST00000147915 Nle1-003 retained_intron Mus_musculus 0 405

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