C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: breast carcinoma amplified sequence 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588720 BCAS3-010 ENSG00000141376 9606 + 17:61388276-61392831 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000588720
Transcript ID Bladder
ENST00000588720 0.736±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000569 CIL_000569_0002 CGP 17:60600183-61392838
CIL_000703 CIL_000703_0001 CGP 17:60677453-61409466

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154396 Bcas3-004 protein_coding Mus_musculus 0 270
ENSMUST00000130343 Bcas3-010 processed_transcript Mus_musculus 0 268
ENSMUST00000145281 Bcas3-008 processed_transcript Mus_musculus 0 268
ENSMUST00000149662 Bcas3-007 protein_coding Mus_musculus 0 268
ENSMUST00000108062 Bcas3-002 protein_coding Mus_musculus 0 268
ENSMUST00000108061 Bcas3-001 protein_coding Mus_musculus 0 268
ENSMUST00000092822 Bcas3-006 protein_coding Mus_musculus 0 267
ENSMUST00000142596 Bcas3-005 protein_coding Mus_musculus 0 267
ENSMUST00000074875 Bcas3-201 protein_coding Mus_musculus 0 231
ENSMUST00000092821 Bcas3-202 protein_coding Mus_musculus 0 231
ENSMUST00000140562 Bcas3-009 processed_transcript Mus_musculus 2e-40 172

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