C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breast carcinoma amplified sequence 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092822 Bcas3-006 ENSMUSG00000059439 10090 + 11:85509638-85826058 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryENSMUST00000092822
Transcript ID Muscle Ovary
ENSMUST00000092822 2.259±0.00 3.803±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000569 CIL_000569_0003 CGP 11:85311244-85826058
CIL_000703 CIL_000703_0002 CGP 11:85353167-85841948

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0071944 IDA cell periphery

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000390652 BCAS3-001 protein_coding Homo_sapiens 0 1116
ENST00000407086 BCAS3-002 protein_coding Homo_sapiens 0 1339
ENST00000408905 BCAS3-013 protein_coding Homo_sapiens 0 1668
ENST00000585744 BCAS3-005 protein_coding Homo_sapiens 0 1116
ENST00000585812 BCAS3-008 processed_transcript Homo_sapiens 0 335
ENST00000585979 BCAS3-028 processed_transcript Homo_sapiens 0 900
ENST00000587002 BCAS3-032 protein_coding Homo_sapiens 2e-32 143
ENST00000587294 BCAS3-031 processed_transcript Homo_sapiens 0 571
ENST00000588462 BCAS3-012 protein_coding Homo_sapiens 0 1445
ENST00000588569 BCAS3-033 processed_transcript Homo_sapiens 0 307
ENST00000588720 BCAS3-010 retained_intron Homo_sapiens 0 267
ENST00000588874 BCAS3-006 protein_coding Homo_sapiens 0 1339
ENST00000589222 BCAS3-004 protein_coding Homo_sapiens 0 1406
ENST00000592702 BCAS3-009 processed_transcript Homo_sapiens 0 267
ENST00000592827 BCAS3-029 processed_transcript Homo_sapiens 0 460
ENST00000613443 BCAS3-201 protein_coding Homo_sapiens 0 881
ENST00000614888 BCAS3-202 protein_coding Homo_sapiens 0 1105

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