C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen and calcium binding EGF domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589116 CCBE1-002 ENSG00000183287 9606 - 18:59435146-59455212 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyMusclePlacentaENST00000589116
Transcript ID Bladder Brain Heart Kidney Muscle Placenta
ENST00000589116 0.715±0.00 0.303±0.00 0.260±0.00 0.428±0.00 0.547±0.00 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P5 CIL_0001P5_0001 CGP 18:59327823-59697380
CIL_0007FI CIL_0007FI_0001 CGP 18:59430940-59904306

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061103 Ccbe1-005 nonsense_mediated_decay Mus_musculus 0 765
ENSMUST00000130300 Ccbe1-001 protein_coding Mus_musculus 0 765
ENSMUST00000146610 Ccbe1-003 processed_transcript Mus_musculus 0 531

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