C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 4 homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589604 VPS4B-005 ENSG00000119541 9606 - 18:63396590-63422463 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000589604
Transcript ID Testis
ENST00000589604 3.312±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000B7 CIL_0000B7_0002 CGP 18:63327726-63422483
CIL_00076J CIL_00076J_0001 CGP 18:63389190-63505085

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094646 Vps4b-001 protein_coding Mus_musculus 0 918
ENSMUST00000112736 Vps4b-002 protein_coding Mus_musculus 0 918
ENSMUST00000147705 Vps4b-005 retained_intron Mus_musculus 0 880

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