C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | histocompatibility (minor) HA-1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000590214  |
HMHA1-003 |
ENSG00000180448 |
9606 | + |
19:1067327-1086626  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008XG | CIL_0008XG_0001 | VISTA | 19:477571-1083531 |
| CIL_0000HU | CIL_0000HU_0001 | CGP | 19:1040101-1086628 |
| CIL_00030S | CIL_00030S_0001 | CGP | 19:1065923-1095380 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005622 | IEA | intracellular |
| GO:0007165 | IEA | signal transduction |
| GO:0035556 | IEA | intracellular signal transduction |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000105373
|
Hmha1-002 | protein_coding | Mus_musculus | 0 | 2329 |
|
ENSMUST00000099501
|
Hmha1-001 | protein_coding | Mus_musculus | 0 | 2329 |
|
ENSMUST00000043311
|
Hmha1-004 | protein_coding | Mus_musculus | 0 | 2156 |
|
ENSMUST00000140974
|
Hmha1-003 | retained_intron | Mus_musculus | 0 | 1729 |
