C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 4 homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591475 VPS4B-006 ENSG00000119541 9606 - 18:63396342-63422483 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLungMuscleENST00000591475
Transcript ID Bladder Heart Lung Muscle
ENST00000591475 1.256±0.00 0.618±0.00 1.460±0.00 0.189±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000B7 CIL_0000B7_0002 CGP 18:63327726-63422483
CIL_00076J CIL_00076J_0001 CGP 18:63389190-63505085

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094646 Vps4b-001 protein_coding Mus_musculus 0 1363
ENSMUST00000112736 Vps4b-002 protein_coding Mus_musculus 0 1363
ENSMUST00000147705 Vps4b-005 retained_intron Mus_musculus 0 881
ENSMUST00000127606 Vps4b-004 processed_transcript Mus_musculus 1e-29 135

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