C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: G patch domain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591680 GPATCH8-001 ENSG00000186566 9606 - 17:44397416-44503401 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000591680
Transcript ID Heart
ENST00000591680 0.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0005IZ CIL_0005IZ_0001 CGP 17:44372180-44503430

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143842 Gpatch8-001 protein_coding Mus_musculus 0 5481
ENSMUST00000069673 Gpatch8-002 processed_transcript Mus_musculus 0 4684
ENSMUST00000131573 Gpatch8-005 processed_transcript Mus_musculus 0 435
ENSMUST00000125754 Gpatch8-003 processed_transcript Mus_musculus 0 233
ENSMUST00000127018 Gpatch8-006 processed_transcript Mus_musculus 0 230
ENSMUST00000126804 Gpatch8-004 processed_transcript Mus_musculus 0 230

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