C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methyl-CpG binding domain protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592012 MBD3-007 ENSG00000071655 9606 - 19:1576640-1585307 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastOvaryTestisENST00000592012
Transcript ID Adipose Adrenal Bladder Breast Ovary Testis
ENST00000592012 11.163±0.00 16.665±0.00 0.347±0.00 0.973±0.00 1.271±0.00 8.928±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YO CIL_0003YO_0001 CGP 19:1554669-1592801
CIL_0003Z8 CIL_0003Z8_0001 CGP 19:1573596-1605445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105347 Mbd3-006 protein_coding Mus_musculus 0 828
ENSMUST00000105349 Mbd3-002 protein_coding Mus_musculus 0 821
ENSMUST00000092295 Mbd3-001 protein_coding Mus_musculus 0 821
ENSMUST00000105348 Mbd3-003 protein_coding Mus_musculus 0 619
ENSMUST00000142997 Mbd3-004 protein_coding Mus_musculus 0 577
ENSMUST00000125618 Mbd3-005 processed_transcript Mus_musculus 0 453

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