C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592226 ITGA2B-004 ENSG00000005961 9606 - 17:44380057-44385202 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyMuscleOvaryENST00000592226
Transcript ID Colon Kidney Muscle Ovary
ENST00000592226 0.050±0.00 0.176±0.00 0.092±0.00 0.201±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0004D6 CIL_0004D6_0002 CGP 17:44353215-44389505
CIL_0005IZ CIL_0005IZ_0001 CGP 17:44372180-44503430

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103086 Itga2b-001 protein_coding Mus_musculus 0 656
ENSMUST00000149519 Itga2b-002 processed_transcript Mus_musculus 0 455
ENSMUST00000124767 Itga2b-005 processed_transcript Mus_musculus 0 252

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