C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin alpha 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149519 Itga2b-002 ENSMUSG00000034664 10090 - 11:102456472-102467199 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartMuscleOvaryPlacentaENSMUST00000149519
Transcript ID Adipose Adrenal Colon Heart Muscle Ovary Placenta
ENSMUST00000149519 0.482±0.00 0.335±0.00 0.255±0.00 0.106±0.00 0.148±0.07 0.719±0.29 0.206±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0002 VISTA 11:102063033-102664797
CIL_0007ST CIL_0007ST_0002 VISTA 11:102292756-102896210
CIL_0004D6 CIL_0004D6_0003 CGP 11:102436981-102470122
CIL_0005IZ CIL_0005IZ_0002 CGP 11:102453297-102556392

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262407 ITGA2B-001 protein_coding Homo_sapiens 0 1531
ENST00000587295 ITGA2B-011 protein_coding Homo_sapiens 0 222
ENST00000592226 ITGA2B-004 retained_intron Homo_sapiens 0 455
ENST00000592462 ITGA2B-003 retained_intron Homo_sapiens 0 1343

Loading