C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592462 ITGA2B-003 ENSG00000005961 9606 - 17:44373924-44383497 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLiverOvaryTestisENST00000592462
Transcript ID Adrenal Brain Breast Heart Kidney Liver Ovary Testis
ENST00000592462 0.176±0.00 0.229±0.00 0.186±0.00 0.044±0.00 0.256±0.00 0.308±0.00 0.169±0.10 0.446±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0004D6 CIL_0004D6_0002 CGP 17:44353215-44389505
CIL_0005IZ CIL_0005IZ_0001 CGP 17:44372180-44503430

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149519 Itga2b-002 processed_transcript Mus_musculus 0 1343
ENSMUST00000103086 Itga2b-001 protein_coding Mus_musculus 0 1334
ENSMUST00000151625 Itga2b-007 processed_transcript Mus_musculus 0 462
ENSMUST00000130433 Itga2b-006 processed_transcript Mus_musculus 0 414
ENSMUST00000124767 Itga2b-005 processed_transcript Mus_musculus 0 327
ENSMUST00000131247 Itga2b-008 processed_transcript Mus_musculus 0 219

Loading