C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, gamma 1, 45kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592524 GJC1-002 ENSG00000182963 9606 - 17:44804247-44830231 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverLungTestisENST00000592524
Transcript ID Breast Liver Lung Testis
ENST00000592524 1.800±0.00 4.089±0.00 0.720±0.00 3.257±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646
CIL_0003CR CIL_0003CR_0001 CGP 17:44759031-44830816
CIL_0006U4 CIL_0006U4_0001 CGP 17:44798448-44850480

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005886 TAS plasma membrane
GO:0005921 TAS gap junction
GO:0006810 NAS transport
GO:0006936 TAS muscle contraction
GO:0007043 TAS cell-cell junction assembly
GO:0007268 TAS synaptic transmission
GO:0014704 TAS intercalated disc
GO:0016021 IEA integral component of membrane
GO:0016264 TAS gap junction assembly
GO:0061024 TAS membrane organization
GO:0086014 TAS atrial cardiac muscle cell action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068933 Gjc1-001 protein_coding Mus_musculus 0 2396
ENSMUST00000092567 Gjc1-004 protein_coding Mus_musculus 0 2230
ENSMUST00000107075 Gjc1-002 protein_coding Mus_musculus 0 2230
ENSMUST00000155089 Gjc1-003 retained_intron Mus_musculus 0 678

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