C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006U4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182963-ENSG00000131097 CGP 9606 17:44798448-44850480
GeneTranscriptPositionBiotype
ENSG00000108883 (EFTUD2)
elongation factor Tu GTP binding domain containing 2 		ENST00000402521 (EFTUD2-004) 44851120-44899445 protein_coding
ENST00000426333 (EFTUD2-002) 44849943-44899662 protein_coding
ENST00000585616 (EFTUD2-022) 44860454-44865268 processed_transcript
ENST00000585794 (EFTUD2-023) 44862760-44865232 retained_intron
ENST00000586276 (EFTUD2-008) 44850810-44863595 retained_intron
ENST00000586654 (EFTUD2-021) 44862790-44868399 retained_intron
ENST00000586875 (EFTUD2-016) 44880477-44881843 retained_intron
ENST00000587914 (EFTUD2-024) 44862753-44864062 retained_intron
ENST00000587957 (EFTUD2-019) 44875633-44879590 retained_intron
ENST00000588340 (EFTUD2-028) 44854975-44857639 retained_intron
ENST00000588374 (EFTUD2-015) 44876089-44894497 nonsense_mediated_decay
ENST00000589211 (EFTUD2-029) 44886663-44892329 processed_transcript
ENST00000589475 (EFTUD2-018) 44879516-44880630 retained_intron
ENST00000589769 (EFTUD2-026) 44851257-44854662 nonsense_mediated_decay
ENST00000589825 (EFTUD2-010) 44883556-44899445 retained_intron
ENST00000590105 (EFTUD2-013) 44894134-44899403 retained_intron
ENST00000590124 (EFTUD2-025) 44851047-44857121 protein_coding
ENST00000590367 (EFTUD2-007) 44850916-44873167 retained_intron
ENST00000590977 (EFTUD2-009) 44850917-44859649 retained_intron
ENST00000591382 (EFTUD2-006) 44850916-44899368 protein_coding
ENST00000591856 (EFTUD2-020) 44864970-44872526 nonsense_mediated_decay
ENST00000592408 (EFTUD2-012) 44885256-44899403 retained_intron
ENST00000592576 (EFTUD2-003) 44850866-44899431 protein_coding
ENST00000592701 (EFTUD2-014) 44885287-44899049 protein_coding
ENST00000593072 (EFTUD2-011) 44883140-44899403 protein_coding
ENST00000593200 (EFTUD2-017) 44875939-44881835 retained_intron
ENSG00000182963 (GJC1)
gap junction protein, gamma 1, 45kDa 		ENST00000330514 (GJC1-003) 44803034-44807884 protein_coding
ENST00000426548 (GJC1-201) 44798448-44830811 protein_coding
ENST00000586267 (GJC1-005) 44805608-44829694 protein_coding
ENST00000586347 (GJC1-008) 44803949-44804966 protein_coding
ENST00000587113 (GJC1-009) 44798448-44805409 protein_coding
ENST00000587239 (GJC1-007) 44805600-44813305 protein_coding
ENST00000590758 (GJC1-001) 44804217-44830813 protein_coding
ENST00000591424 (GJC1-004) 44805507-44830816 protein_coding
ENST00000592524 (GJC1-002) 44804247-44830231 protein_coding
CIL_0006U4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034520-ENSMUSG00000020928 CGP 10090 11:102799579-102838040
GeneTranscriptPositionBiotype
ENSMUSG00000020928 (Higd1b)
HIG1 domain family, member 1B 		ENSMUST00000021302 (Higd1b-001) 102836296-102838040 protein_coding
ENSMUST00000107072 (Higd1b-003) 102836446-102838040 protein_coding
ENSMUST00000107073 (Higd1b-002) 102835849-102838040 protein_coding
ENSMUSG00000034520 (Gjc1)
gap junction protein, gamma 1 		ENSMUST00000068933 (Gjc1-001) 102799579-102819179 protein_coding
ENSMUST00000092567 (Gjc1-004) 102799579-102819700 protein_coding
ENSMUST00000107075 (Gjc1-002) 102799579-102804901 protein_coding
ENSMUST00000131164 (Gjc1-005) 102801176-102819210 processed_transcript
ENSMUST00000155089 (Gjc1-003) 102800731-102805788 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006U4_0001ENSG00000108883ENST00000402521ENST00000426333ENST00000585616ENST00000585794ENST00000586276ENST00000586654ENST00000586875ENST00000587914ENST00000587957ENST00000588340ENST00000588374ENST00000589211ENST00000589475ENST00000589769ENST00000589825ENST00000590105ENST00000590124ENST00000590367ENST00000590977ENST00000591382ENST00000591856ENST00000592408ENST00000592576ENST00000592701ENST00000593072ENST00000593200ENSG00000182963ENST00000330514ENST00000426548ENST00000586267ENST00000586347ENST00000587113ENST00000587239ENST00000590758ENST00000591424ENST00000592524CIL_0006U4_0002ENSMUSG00000020928ENSMUST00000021302ENSMUST00000107072ENSMUST00000107073ENSMUSG00000034520ENSMUST00000068933ENSMUST00000092567ENSMUST00000107075ENSMUST00000131164ENSMUST00000155089
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006U4_0001ENSG00000108883ENST00000402521ENST00000426333ENST00000589825ENST00000590124ENST00000591382ENST00000592576ENSG00000182963ENST00000330514ENST00000426548ENST00000586267ENST00000586347ENST00000587113ENST00000590758ENST00000592524CIL_0006U4_0002ENSMUSG00000020928ENSMUST00000021302ENSMUST00000107072ENSMUST00000107073ENSMUSG00000034520ENSMUST00000068933ENSMUST00000092567ENSMUST00000107075ENSMUST00000155089
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108883 ENST00000402521 12.476±0.00 9.376±0.00 2.383±0.00 N/A 5.983±1.57 4.871±0.88 4.718±2.88 4.781±3.08 3.151±0.14 4.616±0.40 10.796±7.24 10.575±2.99 12.308±3.11 16.322±0.00
ENST00000426333 N/A N/A N/A N/A N/A 1.817±0.00 2.542±0.00 N/A N/A N/A N/A 3.033±0.00 7.960±2.55 N/A
ENST00000585616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589825 N/A N/A 12.509±0.00 N/A 18.722±0.00 21.226±0.00 9.707±0.00 8.594±0.00 13.691±0.00 18.896±0.00 6.872±0.00 50.675±0.00 N/A N/A
ENST00000590105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590124 N/A 23.885±0.00 N/A N/A N/A N/A N/A 15.757±0.00 N/A N/A N/A N/A N/A N/A
ENST00000590367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591382 N/A N/A N/A N/A N/A N/A N/A 1.251±0.00 N/A N/A N/A 19.787±0.00 9.280±0.00 N/A
ENST00000591856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592576 7.076±0.00 11.413±0.00 N/A N/A 10.156±0.00 4.839±0.00 5.884±0.00 9.414±0.00 4.806±0.00 5.660±0.00 14.169±0.00 13.297±2.84 10.254±2.08 17.057±0.57
ENST00000592701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182963 ENST00000330514 N/A N/A N/A 0.573±0.00 N/A 1.625±0.00 N/A N/A N/A 0.818±0.00 N/A 0.353±0.00 N/A N/A
ENST00000426548 1.583±0.00 N/A N/A 0.338±0.00 N/A 1.139±0.00 0.586±0.00 N/A N/A N/A N/A 0.673±0.19 3.105±0.60 1.439±0.00
ENST00000586267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.881±0.00
ENST00000586347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.209±0.00 N/A N/A N/A
ENST00000587113 N/A 1.857±0.00 N/A N/A 1.872±0.00 3.985±0.00 1.794±0.00 0.241±0.12 N/A 1.910±0.00 N/A 0.677±0.15 2.303±0.46 2.220±0.00
ENST00000587239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590758 N/A N/A 0.787±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592524 N/A N/A N/A N/A 1.800±0.00 N/A N/A N/A 4.089±0.00 0.720±0.00 N/A N/A N/A 3.257±0.30
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020928 ENSMUST00000021302 6.678±2.60 1.537±0.51 0.998±0.02 0.968±0.73 2.501±0.88 0.403±0.13 7.142±0.79 1.603±0.45 0.053±0.03 6.785±1.24 1.608±0.45 1.985±1.20 4.004±2.88 0.475±0.19
ENSMUST00000107072 N/A 0.736±0.00 N/A N/A N/A 0.792±0.64 N/A N/A N/A N/A 0.459±0.00 0.905±0.22 1.110±0.98 0.943±0.00
ENSMUST00000107073 4.058±1.70 1.072±0.00 0.707±0.20 2.496±1.86 0.764±0.21 N/A 1.613±0.00 0.264±0.00 N/A 31.665±3.19 0.767±0.00 1.883±0.73 3.135±0.00 0.552±0.35
ENSMUSG00000034520 ENSMUST00000068933 6.385±1.47 1.814±0.95 9.014±0.18 8.320±5.54 2.244±1.43 2.504±0.45 5.598±2.13 1.425±0.82 0.599±0.30 4.857±1.28 1.103±0.43 3.695±1.24 2.178±0.73 2.474±1.15
ENSMUST00000092567 4.574±0.89 0.531±0.09 2.408±0.00 0.713±0.00 1.689±0.72 1.515±0.66 1.847±0.18 1.359±0.54 0.229±0.22 2.285±0.61 0.447±0.07 2.937±1.76 2.370±1.54 1.511±0.22
ENSMUST00000107075 2.314±0.00 0.771±0.39 N/A 3.231±0.74 0.560±0.19 0.714±0.10 N/A 0.350±0.00 0.242±0.10 1.344±0.32 0.229±0.00 1.858±0.98 N/A 0.921±0.05
ENSMUST00000131164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155089 N/A 0.300±0.07 N/A N/A 0.371±0.00 N/A 0.683±0.00 0.290±0.00 0.055±0.02 1.116±0.13 N/A 0.962±0.20 0.658±0.08 N/A

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