C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006U4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182963-ENSG00000131097 CGP 9606 17:44798448-44850480
GeneTranscriptPositionBiotype
ENSG00000108883 (EFTUD2)
elongation factor Tu GTP binding domain containing 2 		ENST00000402521 (EFTUD2-004) 44851120-44899445 protein_coding
ENST00000426333 (EFTUD2-002) 44849943-44899662 protein_coding
ENST00000585616 (EFTUD2-022) 44860454-44865268 processed_transcript
ENST00000585794 (EFTUD2-023) 44862760-44865232 retained_intron
ENST00000586276 (EFTUD2-008) 44850810-44863595 retained_intron
ENST00000586654 (EFTUD2-021) 44862790-44868399 retained_intron
ENST00000586875 (EFTUD2-016) 44880477-44881843 retained_intron
ENST00000587914 (EFTUD2-024) 44862753-44864062 retained_intron
ENST00000587957 (EFTUD2-019) 44875633-44879590 retained_intron
ENST00000588340 (EFTUD2-028) 44854975-44857639 retained_intron
ENST00000588374 (EFTUD2-015) 44876089-44894497 nonsense_mediated_decay
ENST00000589211 (EFTUD2-029) 44886663-44892329 processed_transcript
ENST00000589475 (EFTUD2-018) 44879516-44880630 retained_intron
ENST00000589769 (EFTUD2-026) 44851257-44854662 nonsense_mediated_decay
ENST00000589825 (EFTUD2-010) 44883556-44899445 retained_intron
ENST00000590105 (EFTUD2-013) 44894134-44899403 retained_intron
ENST00000590124 (EFTUD2-025) 44851047-44857121 protein_coding
ENST00000590367 (EFTUD2-007) 44850916-44873167 retained_intron
ENST00000590977 (EFTUD2-009) 44850917-44859649 retained_intron
ENST00000591382 (EFTUD2-006) 44850916-44899368 protein_coding
ENST00000591856 (EFTUD2-020) 44864970-44872526 nonsense_mediated_decay
ENST00000592408 (EFTUD2-012) 44885256-44899403 retained_intron
ENST00000592576 (EFTUD2-003) 44850866-44899431 protein_coding
ENST00000592701 (EFTUD2-014) 44885287-44899049 protein_coding
ENST00000593072 (EFTUD2-011) 44883140-44899403 protein_coding
ENST00000593200 (EFTUD2-017) 44875939-44881835 retained_intron
ENSG00000182963 (GJC1)
gap junction protein, gamma 1, 45kDa 		ENST00000330514 (GJC1-003) 44803034-44807884 protein_coding
ENST00000426548 (GJC1-201) 44798448-44830811 protein_coding
ENST00000586267 (GJC1-005) 44805608-44829694 protein_coding
ENST00000586347 (GJC1-008) 44803949-44804966 protein_coding
ENST00000587113 (GJC1-009) 44798448-44805409 protein_coding
ENST00000587239 (GJC1-007) 44805600-44813305 protein_coding
ENST00000590758 (GJC1-001) 44804217-44830813 protein_coding
ENST00000591424 (GJC1-004) 44805507-44830816 protein_coding
ENST00000592524 (GJC1-002) 44804247-44830231 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006U4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034520-ENSMUSG00000020928 CGP 10090 11:102799579-102838040
GeneTranscriptPositionBiotype
ENSMUSG00000020928 (Higd1b)
HIG1 domain family, member 1B 		ENSMUST00000021302 (Higd1b-001) 102836296-102838040 protein_coding
ENSMUST00000107072 (Higd1b-003) 102836446-102838040 protein_coding
ENSMUST00000107073 (Higd1b-002) 102835849-102838040 protein_coding
ENSMUSG00000034520 (Gjc1)
gap junction protein, gamma 1 		ENSMUST00000068933 (Gjc1-001) 102799579-102819179 protein_coding
ENSMUST00000092567 (Gjc1-004) 102799579-102819700 protein_coding
ENSMUST00000107075 (Gjc1-002) 102799579-102804901 protein_coding
ENSMUST00000131164 (Gjc1-005) 102801176-102819210 processed_transcript
ENSMUST00000155089 (Gjc1-003) 102800731-102805788 retained_intron

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006U4_0001ENSG00000108883ENST00000402521ENST00000426333ENST00000585616ENST00000585794ENST00000586276ENST00000586654ENST00000586875ENST00000587914ENST00000587957ENST00000588340ENST00000588374ENST00000589211ENST00000589475ENST00000589769ENST00000589825ENST00000590105ENST00000590124ENST00000590367ENST00000590977ENST00000591382ENST00000591856ENST00000592408ENST00000592576ENST00000592701ENST00000593072ENST00000593200ENSG00000182963ENST00000330514ENST00000426548ENST00000586267ENST00000586347ENST00000587113ENST00000587239ENST00000590758ENST00000591424ENST00000592524CIL_0006U4_0002ENSMUSG00000020928ENSMUST00000021302ENSMUST00000107072ENSMUST00000107073ENSMUSG00000034520ENSMUST00000068933ENSMUST00000092567ENSMUST00000107075ENSMUST00000131164ENSMUST00000155089
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006U4_0001ENSG00000108883ENST00000402521ENST00000426333ENST00000589825ENST00000590124ENST00000591382ENST00000592576ENSG00000182963ENST00000330514ENST00000426548ENST00000586267ENST00000586347ENST00000587113ENST00000590758ENST00000592524CIL_0006U4_0002ENSMUSG00000020928ENSMUST00000021302ENSMUST00000107072ENSMUST00000107073ENSMUSG00000034520ENSMUST00000068933ENSMUST00000092567ENSMUST00000107075ENSMUST00000155089
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108883 ENST00000402521 12.476±0.00 9.376±0.00 2.383±0.00 N/A 5.983±1.57 4.871±0.88 4.718±2.88 4.781±3.08 3.151±0.14 4.616±0.40 10.796±7.24 10.575±2.99 12.308±3.11 16.322±0.00
ENST00000426333 N/A N/A N/A N/A N/A 1.817±0.00 2.542±0.00 N/A N/A N/A N/A 3.033±0.00 7.960±2.55 N/A
ENST00000585616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589825 N/A N/A 12.509±0.00 N/A 18.722±0.00 21.226±0.00 9.707±0.00 8.594±0.00 13.691±0.00 18.896±0.00 6.872±0.00 50.675±0.00 N/A N/A
ENST00000590105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590124 N/A 23.885±0.00 N/A N/A N/A N/A N/A 15.757±0.00 N/A N/A N/A N/A N/A N/A
ENST00000590367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591382 N/A N/A N/A N/A N/A N/A N/A 1.251±0.00 N/A N/A N/A 19.787±0.00 9.280±0.00 N/A
ENST00000591856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592576 7.076±0.00 11.413±0.00 N/A N/A 10.156±0.00 4.839±0.00 5.884±0.00 9.414±0.00 4.806±0.00 5.660±0.00 14.169±0.00 13.297±2.84 10.254±2.08 17.057±0.57
ENST00000592701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182963 ENST00000330514 N/A N/A N/A 0.573±0.00 N/A 1.625±0.00 N/A N/A N/A 0.818±0.00 N/A 0.353±0.00 N/A N/A
ENST00000426548 1.583±0.00 N/A N/A 0.338±0.00 N/A 1.139±0.00 0.586±0.00 N/A N/A N/A N/A 0.673±0.19 3.105±0.60 1.439±0.00
ENST00000586267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.881±0.00
ENST00000586347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.209±0.00 N/A N/A N/A
ENST00000587113 N/A 1.857±0.00 N/A N/A 1.872±0.00 3.985±0.00 1.794±0.00 0.241±0.12 N/A 1.910±0.00 N/A 0.677±0.15 2.303±0.46 2.220±0.00
ENST00000587239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590758 N/A N/A 0.787±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592524 N/A N/A N/A N/A 1.800±0.00 N/A N/A N/A 4.089±0.00 0.720±0.00 N/A N/A N/A 3.257±0.30
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020928 ENSMUST00000021302 6.678±2.60 1.537±0.51 0.998±0.02 0.968±0.73 2.501±0.88 0.403±0.13 7.142±0.79 1.603±0.45 0.053±0.03 6.785±1.24 1.608±0.45 1.985±1.20 4.004±2.88 0.475±0.19
ENSMUST00000107072 N/A 0.736±0.00 N/A N/A N/A 0.792±0.64 N/A N/A N/A N/A 0.459±0.00 0.905±0.22 1.110±0.98 0.943±0.00
ENSMUST00000107073 4.058±1.70 1.072±0.00 0.707±0.20 2.496±1.86 0.764±0.21 N/A 1.613±0.00 0.264±0.00 N/A 31.665±3.19 0.767±0.00 1.883±0.73 3.135±0.00 0.552±0.35
ENSMUSG00000034520 ENSMUST00000068933 6.385±1.47 1.814±0.95 9.014±0.18 8.320±5.54 2.244±1.43 2.504±0.45 5.598±2.13 1.425±0.82 0.599±0.30 4.857±1.28 1.103±0.43 3.695±1.24 2.178±0.73 2.474±1.15
ENSMUST00000092567 4.574±0.89 0.531±0.09 2.408±0.00 0.713±0.00 1.689±0.72 1.515±0.66 1.847±0.18 1.359±0.54 0.229±0.22 2.285±0.61 0.447±0.07 2.937±1.76 2.370±1.54 1.511±0.22
ENSMUST00000107075 2.314±0.00 0.771±0.39 N/A 3.231±0.74 0.560±0.19 0.714±0.10 N/A 0.350±0.00 0.242±0.10 1.344±0.32 0.229±0.00 1.858±0.98 N/A 0.921±0.05
ENSMUST00000131164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155089 N/A 0.300±0.07 N/A N/A 0.371±0.00 N/A 0.683±0.00 0.290±0.00 0.055±0.02 1.116±0.13 N/A 0.962±0.20 0.658±0.08 N/A

Loading