C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ligase III, DNA, ATP-dependent
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592690 LIG3-006 ENSG00000005156 9606 + 17:34980558-34989657 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055V CIL_00055V_0001 CGP 17:34580749-34981078
CIL_000745 CIL_000745_0001 CGP 17:34927859-34981078
CIL_00055Q CIL_00055Q_0001 CGP 17:34961530-35009743
CIL_00055O CIL_00055O_0001 CGP 17:34980494-35089319

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173727 Lig3-011 protein_coding Mus_musculus 0 806
ENSMUST00000173347 Lig3-007 protein_coding Mus_musculus 0 806
ENSMUST00000172609 Lig3-010 retained_intron Mus_musculus 0 806
ENSMUST00000021039 Lig3-201 protein_coding Mus_musculus 0 797
ENSMUST00000173722 Lig3-009 protein_coding Mus_musculus 0 797
ENSMUST00000131537 Lig3-008 protein_coding Mus_musculus 0 797
ENSMUST00000173009 Lig3-006 protein_coding Mus_musculus 0 797
ENSMUST00000080461 Lig3-002 protein_coding Mus_musculus 0 797
ENSMUST00000092849 Lig3-001 protein_coding Mus_musculus 0 797

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