C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00055Q_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000198783-ENSG00000005156 | CGP | 9606 | 17:34961530-35009743  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000005156  (LIG3)ligase III, DNA, ATP-dependent |
ENST00000262327 (LIG3-002)
|
34980546-35003172 | protein_coding | |
|
ENST00000378526 (LIG3-001)
|
34980494-35009743 | protein_coding | ||
|
ENST00000585370 (LIG3-015)
|
34997756-34998671 | nonsense_mediated_decay | ||
|
ENST00000585740 (LIG3-007)
|
34980559-34992607 | protein_coding | ||
|
ENST00000585941 (LIG3-005)
|
34980512-34994429 | protein_coding | ||
|
ENST00000586058 (LIG3-012)
|
34994187-34998254 | retained_intron | ||
|
ENST00000586119 (LIG3-014)
|
34997718-35001293 | retained_intron | ||
|
ENST00000586407 (LIG3-008)
|
34980640-34989540 | processed_transcript | ||
|
ENST00000586435 (LIG3-010)
|
34986094-34991314 | retained_intron | ||
|
ENST00000588109 (LIG3-009)
|
34983452-34991065 | nonsense_mediated_decay | ||
|
ENST00000588713 (LIG3-013)
|
34994275-34996373 | retained_intron | ||
|
ENST00000590181 (LIG3-004)
|
34980577-34989880 | retained_intron | ||
|
ENST00000590630 (LIG3-011)
|
34991637-34997825 | retained_intron | ||
|
ENST00000592244 (LIG3-016)
|
35002834-35004372 | retained_intron | ||
|
ENST00000592690 (LIG3-006)
|
34980558-34989657 | protein_coding | ||
|
ENST00000593099 (LIG3-003)
|
34997034-35004804 | retained_intron | ||
|
ENSG00000092871 (RFFL) ring finger and FYVE-like domain containing E3 ubiquitin protein ligase |
ENST00000315249 (RFFL-001)
|
35005990-35089319 | protein_coding | |
|
ENST00000394597 (RFFL-004)
|
35009118-35063852 | protein_coding | ||
|
ENST00000413582 (RFFL-003)
|
35011909-35042297 | protein_coding | ||
|
ENST00000414419 (RFFL-009)
|
35021506-35088835 | protein_coding | ||
|
ENST00000415395 (RFFL-002)
|
35011679-35042351 | protein_coding | ||
|
ENST00000447669 (RFFL-005)
|
35011614-35089315 | protein_coding | ||
|
ENST00000580569 (RFFL-012)
|
35007246-35008232 | processed_transcript | ||
|
ENST00000581039 (RFFL-011)
|
35012002-35021411 | protein_coding | ||
|
ENST00000581265 (RFFL-008)
|
35021622-35089194 | nonsense_mediated_decay | ||
|
ENST00000582308 (RFFL-010)
|
35016462-35026568 | protein_coding | ||
|
ENST00000584541 (RFFL-007)
|
35012049-35089247 | processed_transcript | ||
|
ENST00000584655 (RFFL-006)
|
35009112-35089295 | protein_coding | ||
|
ENSG00000132141 (CCT6B) chaperonin containing TCP1, subunit 6B (zeta 2) |
ENST00000314144 (CCT6B-001)
|
34927919-34961509 | protein_coding | |
|
ENST00000421975 (CCT6B-003)
|
34927859-34961402 | protein_coding | ||
|
ENST00000436961 (CCT6B-002)
|
34927932-34961458 | protein_coding | ||
|
ENST00000577307 (CCT6B-004)
|
34927930-34949715 | retained_intron | ||
|
ENST00000585073 (CCT6B-005)
|
34942559-34981078 | protein_coding | ||
|
ENSG00000198783 (ZNF830) zinc finger protein 830 |
ENST00000361952 (ZNF830-001)
|
34961530-34963775 | protein_coding | |
|
ENST00000578339 (ZNF830-002)
|
34962365-34963186 | nonsense_mediated_decay | ||
| CIL_00055Q_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000046010-ENSMUSG00000020697 | CGP | 10090 | 11:82764345-82804274 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000020696 (Rffl) ring finger and FYVE like domain containing protein |
ENSMUST00000021036 (Rffl-003)
|
82805607-82829031 | protein_coding | |
|
ENSMUST00000071152 (Rffl-201)
|
82803822-82871210 | protein_coding | ||
|
ENSMUST00000074515 (Rffl-001)
|
82802449-82829043 | protein_coding | ||
|
ENSMUST00000093975 (Rffl-202)
|
82803822-82870744 | protein_coding | ||
|
ENSMUST00000103218 (Rffl-002)
|
82807422-82829043 | protein_coding | ||
|
ENSMUST00000108173 (Rffl-203)
|
82803822-82871210 | protein_coding | ||
|
ENSMUST00000126660 (Rffl-004)
|
82812669-82846092 | protein_coding | ||
|
ENSMUSG00000046010 (Zfp830) zinc finger protein 830 |
ENSMUST00000056677 (Zfp830-001)
|
82764345-82765935 | protein_coding | |
|
ENSMUSG00000085175 (Gm11423) predicted gene 11423 |
ENSMUST00000136051 (Gm11423-002)
|
82779831-82781042 | antisense | |
|
ENSMUST00000152784 (Gm11423-001)
|
82779601-82781042 | antisense | ||
Expression Patterns
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