Transcript ID | Adrenal | Ovary | Testis |
---|---|---|---|
ENSMUST00000080461 | 3.032±0.69 | 5.857±1.55 | 33.933±9.47 |
Transcript Info |
||||||
Description: | ligase III, DNA, ATP-dependent | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000080461 | Lig3-002 | ENSMUSG00000020697 | 10090 | + | 11:82781185-82800653 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_00055Q | CIL_00055Q_0002 | CGP | 11:82764345-82804274 |
CIL_00055O | CIL_00055O_0002 | CGP | 11:82781108-82871210 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000794 | IDA | condensed nuclear chromosome |
GO:0000795 | IDA | synaptonemal complex |
GO:0003677 | IEA | DNA binding |
GO:0003910 | IBA | DNA ligase (ATP) activity |
GO:0005515 | IPI | protein binding |
GO:0005524 | IEA | ATP binding |
GO:0005634 | IBA | nucleus |
GO:0005694 | IBA | chromosome |
GO:0006266 | IBA | DNA ligation |
GO:0006273 | IBA | lagging strand elongation |
GO:0006289 | IBA | nucleotide-excision repair |
GO:0006303 | IMP | double-strand break repair via nonhomologous end joining |
GO:0006310 | IEA | DNA recombination |
GO:0008270 | IEA | zinc ion binding |
GO:0043504 | IMP | mitochondrial DNA repair |
GO:0045910 | IMP | negative regulation of DNA recombination |
GO:0051103 | IEA | DNA ligation involved in DNA repair |
GO:0071897 | IEA | DNA biosynthetic process |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENST00000262327 | LIG3-002 | protein_coding | Homo_sapiens | 0 | 3326 |
ENST00000378526 | LIG3-001 | protein_coding | Homo_sapiens | 0 | 3275 |
ENST00000585370 | LIG3-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 217 |
ENST00000585740 | LIG3-007 | protein_coding | Homo_sapiens | 0 | 998 |
ENST00000585941 | LIG3-005 | protein_coding | Homo_sapiens | 0 | 1912 |
ENST00000586058 | LIG3-012 | retained_intron | Homo_sapiens | 0 | 712 |
ENST00000586119 | LIG3-014 | retained_intron | Homo_sapiens | 0 | 730 |
ENST00000586435 | LIG3-010 | retained_intron | Homo_sapiens | 0 | 409 |
ENST00000588109 | LIG3-009 | nonsense_mediated_decay | Homo_sapiens | 6e-33 | 145 |
ENST00000588713 | LIG3-013 | retained_intron | Homo_sapiens | 0 | 407 |
ENST00000590181 | LIG3-004 | retained_intron | Homo_sapiens | 0 | 950 |
ENST00000590630 | LIG3-011 | retained_intron | Homo_sapiens | 0 | 1227 |
ENST00000592690 | LIG3-006 | protein_coding | Homo_sapiens | 0 | 797 |
ENST00000593099 | LIG3-003 | retained_intron | Homo_sapiens | 0 | 276 |