C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000745_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132141-ENSG00000132141 CGP 9606 17:34927859-34981078
GeneTranscriptPositionBiotype
ENSG00000005156 (LIG3)
ligase III, DNA, ATP-dependent 		ENST00000262327 (LIG3-002) 34980546-35003172 protein_coding
ENST00000378526 (LIG3-001) 34980494-35009743 protein_coding
ENST00000585370 (LIG3-015) 34997756-34998671 nonsense_mediated_decay
ENST00000585740 (LIG3-007) 34980559-34992607 protein_coding
ENST00000585941 (LIG3-005) 34980512-34994429 protein_coding
ENST00000586058 (LIG3-012) 34994187-34998254 retained_intron
ENST00000586119 (LIG3-014) 34997718-35001293 retained_intron
ENST00000586407 (LIG3-008) 34980640-34989540 processed_transcript
ENST00000586435 (LIG3-010) 34986094-34991314 retained_intron
ENST00000588109 (LIG3-009) 34983452-34991065 nonsense_mediated_decay
ENST00000588713 (LIG3-013) 34994275-34996373 retained_intron
ENST00000590181 (LIG3-004) 34980577-34989880 retained_intron
ENST00000590630 (LIG3-011) 34991637-34997825 retained_intron
ENST00000592244 (LIG3-016) 35002834-35004372 retained_intron
ENST00000592690 (LIG3-006) 34980558-34989657 protein_coding
ENST00000593099 (LIG3-003) 34997034-35004804 retained_intron
ENSG00000132141 (CCT6B)
chaperonin containing TCP1, subunit 6B (zeta 2) 		ENST00000314144 (CCT6B-001) 34927919-34961509 protein_coding
ENST00000421975 (CCT6B-003) 34927859-34961402 protein_coding
ENST00000436961 (CCT6B-002) 34927932-34961458 protein_coding
ENST00000577307 (CCT6B-004) 34927930-34949715 retained_intron
ENST00000585073 (CCT6B-005) 34942559-34981078 protein_coding
ENSG00000198783 (ZNF830)
zinc finger protein 830 		ENST00000361952 (ZNF830-001) 34961530-34963775 protein_coding
ENST00000578339 (ZNF830-002) 34962365-34963186 nonsense_mediated_decay
CIL_000745_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020698-ENSMUSG00000046010 CGP 10090 11:82719250-82765935
GeneTranscriptPositionBiotype
ENSMUSG00000020698 (Cct6b)
chaperonin containing Tcp1, subunit 6b (zeta) 		ENSMUST00000021040 (Cct6b-001) 82719250-82764306 protein_coding
ENSMUST00000100722 (Cct6b-002) 82719250-82764321 protein_coding
ENSMUSG00000046010 (Zfp830)
zinc finger protein 830 		ENSMUST00000056677 (Zfp830-001) 82764345-82765935 protein_coding
ENSMUSG00000081828 (Gm11420)
predicted gene 11420 		ENSMUST00000120047 (Gm11420-001) 82745804-82746205 processed_pseudogene
ENSMUSG00000083203 (Gm11421)
predicted gene 11421 		ENSMUST00000122124 (Gm11421-001) 82725143-82725436 processed_pseudogene
ENSMUSG00000083371 (Gm11422)
predicted gene 11422 		ENSMUST00000118925 (Gm11422-001) 82728000-82729102 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000745_0001ENSG00000005156ENST00000262327ENST00000378526ENST00000585370ENST00000585740ENST00000585941ENST00000586058ENST00000586119ENST00000586407ENST00000586435ENST00000588109ENST00000588713ENST00000590181ENST00000590630ENST00000592244ENST00000592690ENST00000593099ENSG00000132141ENST00000314144ENST00000421975ENST00000436961ENST00000577307ENST00000585073ENSG00000198783ENST00000361952ENST00000578339CIL_000745_0002ENSMUSG00000020698ENSMUST00000021040ENSMUST00000100722ENSMUSG00000046010ENSMUST00000056677ENSMUSG00000081828ENSMUST00000120047ENSMUSG00000083203ENSMUST00000122124ENSMUSG00000083371ENSMUST00000118925
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000745_0001ENSG00000005156ENST00000262327ENST00000378526ENST00000585941ENST00000586119ENST00000590181ENSG00000132141ENST00000314144ENST00000421975ENSG00000198783ENST00000361952ENST00000578339CIL_000745_0002ENSMUSG00000020698ENSMUST00000021040ENSMUST00000100722ENSMUSG00000046010ENSMUST00000056677ENSMUSG00000081828ENSMUST00000120047ENSMUSG00000083203ENSMUST00000122124ENSMUSG00000083371ENSMUST00000118925
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005156 ENST00000262327 N/A N/A 2.021±0.00 N/A N/A 3.680±0.00 2.051±0.99 N/A 2.302±0.00 4.255±0.00 5.587±0.00 7.076±1.35 6.259±0.62 N/A
ENST00000378526 N/A N/A 0.742±0.00 1.248±0.00 1.206±0.00 1.154±0.00 N/A N/A 1.216±0.00 1.029±0.00 1.184±0.00 2.186±0.14 N/A N/A
ENST00000585370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585941 N/A N/A N/A N/A N/A N/A 1.657±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000586058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.449±0.00 N/A N/A N/A
ENST00000586407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590181 N/A N/A N/A N/A N/A 7.859±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000132141 ENST00000314144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 62.864±21.93
ENST00000421975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.056±0.00
ENST00000436961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198783 ENST00000361952 1.915±0.00 2.743±0.00 0.247±0.00 2.549±0.07 2.034±0.20 1.781±0.91 1.322±0.33 1.498±0.73 1.497±0.27 1.745±0.19 0.715±0.41 3.746±2.34 3.759±1.98 7.221±2.02
ENST00000578339 2.888±0.00 5.231±0.00 0.803±0.00 3.087±0.00 3.892±0.00 2.755±1.71 1.750±0.00 3.901±1.69 2.170±1.00 1.056±0.00 0.678±0.00 5.008±1.64 3.581±0.83 8.899±3.41
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020698 ENSMUST00000021040 0.136±0.09 0.085±0.00 0.214±0.04 0.125±0.05 0.195±0.07 0.141±0.07 0.185±0.09 0.243±0.11 0.112±0.04 0.115±0.05 0.092±0.03 0.268±0.08 0.539±0.58 84.076±71.66
ENSMUST00000100722 0.102±0.06 0.116±0.04 N/A N/A 0.060±0.03 0.170±0.00 0.052±0.01 N/A 0.021±0.01 0.087±0.06 N/A 0.172±0.06 N/A 21.480±4.45
ENSMUSG00000046010 ENSMUST00000056677 2.329±0.75 1.943±0.00 6.763±0.94 5.056±2.36 2.047±1.60 4.770±0.55 1.577±0.34 4.027±0.62 4.709±2.83 2.720±0.86 3.385±0.33 8.707±4.53 12.348±5.33 17.386±11.07
ENSMUSG00000081828 ENSMUST00000120047 0.436±0.00 N/A 0.211±0.09 N/A N/A N/A N/A N/A 0.093±0.02 N/A 0.070±0.00 0.151±0.03 0.236±0.20 0.478±0.37
ENSMUSG00000083203 ENSMUST00000122124 N/A N/A 0.343±0.04 N/A N/A N/A N/A N/A 0.065±0.01 N/A N/A N/A 0.391±0.50 1.531±0.08
ENSMUSG00000083371 ENSMUST00000118925 0.079±0.01 0.169±0.06 0.027±0.01 0.022±0.00 0.132±0.04 0.102±0.03 N/A 0.045±0.02 0.052±0.04 0.130±0.02 0.045±0.00 0.143±0.06 0.131±0.12 0.239±0.15

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