C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00055V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181291-ENSG00000132141 CGP 9606 17:34580749-34981078
GeneTranscriptPositionBiotype
ENSG00000005156 (LIG3)
ligase III, DNA, ATP-dependent 		ENST00000262327 (LIG3-002) 34980546-35003172 protein_coding
ENST00000378526 (LIG3-001) 34980494-35009743 protein_coding
ENST00000585370 (LIG3-015) 34997756-34998671 nonsense_mediated_decay
ENST00000585740 (LIG3-007) 34980559-34992607 protein_coding
ENST00000585941 (LIG3-005) 34980512-34994429 protein_coding
ENST00000586058 (LIG3-012) 34994187-34998254 retained_intron
ENST00000586119 (LIG3-014) 34997718-35001293 retained_intron
ENST00000586407 (LIG3-008) 34980640-34989540 processed_transcript
ENST00000586435 (LIG3-010) 34986094-34991314 retained_intron
ENST00000588109 (LIG3-009) 34983452-34991065 nonsense_mediated_decay
ENST00000588713 (LIG3-013) 34994275-34996373 retained_intron
ENST00000590181 (LIG3-004) 34980577-34989880 retained_intron
ENST00000590630 (LIG3-011) 34991637-34997825 retained_intron
ENST00000592244 (LIG3-016) 35002834-35004372 retained_intron
ENST00000592690 (LIG3-006) 34980558-34989657 protein_coding
ENST00000593099 (LIG3-003) 34997034-35004804 retained_intron
ENSG00000132141 (CCT6B)
chaperonin containing TCP1, subunit 6B (zeta 2) 		ENST00000314144 (CCT6B-001) 34927919-34961509 protein_coding
ENST00000421975 (CCT6B-003) 34927859-34961402 protein_coding
ENST00000436961 (CCT6B-002) 34927932-34961458 protein_coding
ENST00000577307 (CCT6B-004) 34927930-34949715 retained_intron
ENST00000585073 (CCT6B-005) 34942559-34981078 protein_coding
ENSG00000181291 (TMEM132E)
transmembrane protein 132E 		ENST00000321639 (TMEM132E-001) 34580749-34639318 protein_coding
ENST00000577271 (TMEM132E-002) 34635793-34637506 retained_intron
ENSG00000198783 (ZNF830)
zinc finger protein 830 		ENST00000361952 (ZNF830-001) 34961530-34963775 protein_coding
ENST00000578339 (ZNF830-002) 34962365-34963186 nonsense_mediated_decay
ENSG00000264174 (RP11-212E8.1)
 ENST00000577556 (RP11-212E8.1-001) 34725509-34726170 lincRNA
ENSG00000264622 (RP11-642M2.1)
 ENST00000579327 (RP11-642M2.1-001) 34837871-34859046 lincRNA
ENSG00000278860 (RP11-28A22.2)
 ENST00000624723 (RP11-28A22.2-001) 34614409-34614809 TEC
CIL_00055V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020701-ENSMUSG00000020698 CGP 10090 11:82388900-82764321
GeneTranscriptPositionBiotype
ENSMUSG00000020698 (Cct6b)
chaperonin containing Tcp1, subunit 6b (zeta) 		ENSMUST00000021040 (Cct6b-001) 82719250-82764306 protein_coding
ENSMUST00000100722 (Cct6b-002) 82719250-82764321 protein_coding
ENSMUSG00000020701 (Tmem132e)
transmembrane protein 132E 		ENSMUST00000054245 (Tmem132e-001) 82388900-82446332 protein_coding
ENSMUST00000092852 (Tmem132e-201) 82388900-82446327 protein_coding
ENSMUST00000132477 (Tmem132e-002) 82389123-82434723 processed_transcript
ENSMUSG00000069796 (Gm11426)
predicted gene 11426 		ENSMUST00000125600 (Gm11426-001) 82633353-82636309 lincRNA
ENSMUSG00000081828 (Gm11420)
predicted gene 11420 		ENSMUST00000120047 (Gm11420-001) 82745804-82746205 processed_pseudogene
ENSMUSG00000083203 (Gm11421)
predicted gene 11421 		ENSMUST00000122124 (Gm11421-001) 82725143-82725436 processed_pseudogene
ENSMUSG00000083371 (Gm11422)
predicted gene 11422 		ENSMUST00000118925 (Gm11422-001) 82728000-82729102 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055V_0001ENSG00000005156ENST00000262327ENST00000378526ENST00000585370ENST00000585740ENST00000585941ENST00000586058ENST00000586119ENST00000586407ENST00000586435ENST00000588109ENST00000588713ENST00000590181ENST00000590630ENST00000592244ENST00000592690ENST00000593099ENSG00000132141ENST00000314144ENST00000421975ENST00000436961ENST00000577307ENST00000585073ENSG00000181291ENST00000321639ENST00000577271ENSG00000198783ENST00000361952ENST00000578339ENSG00000264174ENST00000577556ENSG00000264622ENST00000579327ENSG00000278860ENST00000624723CIL_00055V_0002ENSMUSG00000020698ENSMUST00000021040ENSMUST00000100722ENSMUSG00000020701ENSMUST00000054245ENSMUST00000092852ENSMUST00000132477ENSMUSG00000069796ENSMUST00000125600ENSMUSG00000081828ENSMUST00000120047ENSMUSG00000083203ENSMUST00000122124ENSMUSG00000083371ENSMUST00000118925
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055V_0001ENSG00000005156ENST00000262327ENST00000378526ENST00000585941ENST00000586119ENST00000590181ENSG00000132141ENST00000314144ENST00000421975ENSG00000181291ENST00000321639ENST00000577271ENSG00000198783ENST00000361952ENST00000578339ENSG00000264174ENST00000577556ENSG00000264622ENST00000579327ENSG00000278860ENST00000624723CIL_00055V_0002ENSMUSG00000020698ENSMUST00000021040ENSMUST00000100722ENSMUSG00000020701ENSMUST00000054245ENSMUST00000092852ENSMUST00000132477ENSMUSG00000069796ENSMUST00000125600ENSMUSG00000081828ENSMUST00000120047ENSMUSG00000083203ENSMUST00000122124ENSMUSG00000083371ENSMUST00000118925
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005156 ENST00000262327 N/A N/A 2.021±0.00 N/A N/A 3.680±0.00 2.051±0.99 N/A 2.302±0.00 4.255±0.00 5.587±0.00 7.076±1.35 6.259±0.62 N/A
ENST00000378526 N/A N/A 0.742±0.00 1.248±0.00 1.206±0.00 1.154±0.00 N/A N/A 1.216±0.00 1.029±0.00 1.184±0.00 2.186±0.14 N/A N/A
ENST00000585370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585941 N/A N/A N/A N/A N/A N/A 1.657±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000586058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.449±0.00 N/A N/A N/A
ENST00000586407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590181 N/A N/A N/A N/A N/A 7.859±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000132141 ENST00000314144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 62.864±21.93
ENST00000421975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.056±0.00
ENST00000436961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000181291 ENST00000321639 0.115±0.00 0.186±0.00 0.510±0.00 0.746±0.32 0.138±0.07 0.129±0.01 0.022±0.00 0.296±0.28 0.068±0.05 0.008±0.00 N/A 0.366±0.32 0.120±0.07 1.203±0.17
ENST00000577271 N/A N/A N/A 0.610±0.00 N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 0.086±0.00 N/A
ENSG00000198783 ENST00000361952 1.915±0.00 2.743±0.00 0.247±0.00 2.549±0.07 2.034±0.20 1.781±0.91 1.322±0.33 1.498±0.73 1.497±0.27 1.745±0.19 0.715±0.41 3.746±2.34 3.759±1.98 7.221±2.02
ENST00000578339 2.888±0.00 5.231±0.00 0.803±0.00 3.087±0.00 3.892±0.00 2.755±1.71 1.750±0.00 3.901±1.69 2.170±1.00 1.056±0.00 0.678±0.00 5.008±1.64 3.581±0.83 8.899±3.41
ENSG00000264174 ENST00000577556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A 0.254±0.11
ENSG00000264622 ENST00000579327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.181±0.09
ENSG00000278860 ENST00000624723 N/A N/A N/A 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020698 ENSMUST00000021040 0.136±0.09 0.085±0.00 0.214±0.04 0.125±0.05 0.195±0.07 0.141±0.07 0.185±0.09 0.243±0.11 0.112±0.04 0.115±0.05 0.092±0.03 0.268±0.08 0.539±0.58 84.076±71.66
ENSMUST00000100722 0.102±0.06 0.116±0.04 N/A N/A 0.060±0.03 0.170±0.00 0.052±0.01 N/A 0.021±0.01 0.087±0.06 N/A 0.172±0.06 N/A 21.480±4.45
ENSMUSG00000020701 ENSMUST00000054245 0.384±0.07 0.509±0.19 0.363±0.01 1.395±0.50 0.413±0.26 0.548±0.23 0.044±0.00 0.102±0.03 0.304±0.16 N/A N/A 2.357±0.47 2.999±2.33 0.131±0.02
ENSMUST00000092852 0.170±0.20 0.295±0.09 0.399±0.09 1.808±0.65 0.358±0.16 0.156±0.03 0.021±0.01 0.079±0.04 0.247±0.13 0.015±0.01 0.013±0.00 0.257±0.04 7.692±6.70 0.096±0.07
ENSMUST00000132477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.04
ENSMUSG00000069796 ENSMUST00000125600 N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A N/A N/A N/A 0.178±0.12 0.002±0.00 0.031±0.01
ENSMUSG00000081828 ENSMUST00000120047 0.436±0.00 N/A 0.211±0.09 N/A N/A N/A N/A N/A 0.093±0.02 N/A 0.070±0.00 0.151±0.03 0.236±0.20 0.478±0.37
ENSMUSG00000083203 ENSMUST00000122124 N/A N/A 0.343±0.04 N/A N/A N/A N/A N/A 0.065±0.01 N/A N/A N/A 0.391±0.50 1.531±0.08
ENSMUSG00000083371 ENSMUST00000118925 0.079±0.01 0.169±0.06 0.027±0.01 0.022±0.00 0.132±0.04 0.102±0.03 N/A 0.045±0.02 0.052±0.04 0.130±0.02 0.045±0.00 0.143±0.06 0.131±0.12 0.239±0.15

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