C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000595530 PAFAH1B3-004 ENSG00000079462 9606 - 19:42297280-42302770 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyMuscleOvaryPlacentaTestisENST00000595530
Transcript ID Adipose Bladder Brain Breast Colon Kidney Muscle Ovary Placenta Testis
ENST00000595530 1.240±0.00 1.164±0.00 1.717±0.00 1.130±0.00 2.881±0.13 5.641±0.00 0.986±0.61 9.443±4.61 6.445±3.38 13.823±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005V7 CIL_0005V7_0001 CGP 19:42268537-42303546
CIL_0005V8 CIL_0005V8_0001 CGP 19:42297033-42310821

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005583 Pafah1b3-001 protein_coding Mus_musculus 0 643
ENSMUST00000148150 Pafah1b3-005 protein_coding Mus_musculus 0 553
ENSMUST00000108410 Pafah1b3-007 protein_coding Mus_musculus 0 544
ENSMUST00000155118 Pafah1b3-002 protein_coding Mus_musculus 0 531
ENSMUST00000140093 Pafah1b3-008 retained_intron Mus_musculus 0 435

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