C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000598098 RPS5-005 ENSG00000083845 9606 + 19:58387264-58394804 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverMuscleOvaryENST00000598098
Transcript ID Bladder Breast Colon Heart Kidney Liver Muscle Ovary
ENST00000598098 40.702±0.00 72.044±0.00 126.713±0.00 13.816±0.00 37.525±0.00 27.280±0.00 99.379±0.00 75.272±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000007 CIL_000007_0001 CGP 19:58386400-58397079

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004554 Rps5-001 protein_coding Mus_musculus 0 440
ENSMUST00000108539 Rps5-002 protein_coding Mus_musculus 0 440
ENSMUST00000137329 Rps5-004 protein_coding Mus_musculus 0 315
ENSMUST00000147435 Rps5-003 protein_coding Mus_musculus 0 315
ENSMUST00000139349 Rps5-006 retained_intron Mus_musculus 1.99993e-41 172

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