C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Rho guanine nucleotide exchange factor (GEF) 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000599589  |
ARHGEF1-009 |
ENSG00000076928 |
9606 | + |
19:41895379-41930150  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003UK | CIL_0003UK_0002 | CGP | 19:41877120-41930150 |
| CIL_0003VE | CIL_0003VE_0001 | CGP | 19:41883161-41959390 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005089 | IEA | Rho guanyl-nucleotide exchange factor activity |
| GO:0035023 | IEA | regulation of Rho protein signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000132751
|
Arhgef1-008 | protein_coding | Mus_musculus | 0 | 2180 |
|
ENSMUST00000098683
|
Arhgef1-001 | protein_coding | Mus_musculus | 0 | 2102 |
|
ENSMUST00000117796
|
Arhgef1-002 | protein_coding | Mus_musculus | 0 | 2047 |
|
ENSMUST00000145783
|
Arhgef1-005 | processed_transcript | Mus_musculus | 0 | 1969 |
|
ENSMUST00000117419
|
Arhgef1-006 | protein_coding | Mus_musculus | 0 | 1700 |
|
ENSMUST00000047873
|
Arhgef1-003 | protein_coding | Mus_musculus | 0 | 1700 |
|
ENSMUST00000132786
|
Arhgef1-015 | processed_transcript | Mus_musculus | 0 | 704 |
|
ENSMUST00000126918
|
Arhgef1-014 | retained_intron | Mus_musculus | 0 | 348 |
|
ENSMUST00000126484
|
Arhgef1-013 | retained_intron | Mus_musculus | 0 | 315 |
|
ENSMUST00000129928
|
Arhgef1-012 | retained_intron | Mus_musculus | 0 | 239 |
