| Transcript ID | Brain | Muscle |
|---|---|---|
| ENSMUST00000117796 | 10.441±0.00 | 3.897±1.70 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Rho guanine nucleotide exchange factor (GEF) 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000117796  |
Arhgef1-002 |
ENSMUSG00000040940 |
10090 | + |
7:24902912-24926592  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003UK | CIL_0003UK_0003 | CGP | 7:24897381-24926592 |
| CIL_0003VE | CIL_0003VE_0002 | CGP | 7:24902912-24972728 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005089 | IEA | Rho guanyl-nucleotide exchange factor activity |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IEA | cytoplasm |
| GO:0032321 | IEA | positive regulation of Rho GTPase activity |
| GO:0038032 | IEA | termination of G-protein coupled receptor signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000337665
|
ARHGEF1-006 | protein_coding | Homo_sapiens | 0 | 2080 |
|
ENST00000347545
|
ARHGEF1-001 | protein_coding | Homo_sapiens | 0 | 2080 |
|
ENST00000354532
|
ARHGEF1-005 | protein_coding | Homo_sapiens | 0 | 2071 |
|
ENST00000378152
|
ARHGEF1-007 | protein_coding | Homo_sapiens | 0 | 1700 |
|
ENST00000594044
|
ARHGEF1-018 | retained_intron | Homo_sapiens | 0 | 726 |
|
ENST00000594258
|
ARHGEF1-017 | protein_coding | Homo_sapiens | 0 | 1042 |
|
ENST00000594521
|
ARHGEF1-015 | protein_coding | Homo_sapiens | 0 | 713 |
|
ENST00000595723
|
ARHGEF1-022 | protein_coding | Homo_sapiens | 0 | 767 |
|
ENST00000595897
|
ARHGEF1-011 | retained_intron | Homo_sapiens | 0 | 894 |
|
ENST00000598444
|
ARHGEF1-021 | retained_intron | Homo_sapiens | 3e-29 | 132 |
|
ENST00000598812
|
ARHGEF1-014 | nonsense_mediated_decay | Homo_sapiens | 0 | 281 |
|
ENST00000599589
|
ARHGEF1-009 | protein_coding | Homo_sapiens | 0 | 2047 |
|
ENST00000599846
|
ARHGEF1-010 | protein_coding | Homo_sapiens | 0 | 3574 |
|
ENST00000600274
|
ARHGEF1-002 | retained_intron | Homo_sapiens | 0 | 2080 |
|
ENST00000600387
|
ARHGEF1-012 | retained_intron | Homo_sapiens | 0 | 429 |
|
ENST00000600517
|
ARHGEF1-019 | nonsense_mediated_decay | Homo_sapiens | 0 | 287 |
