C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000600023 CTB-187L3.1-001 ENSG00000269765 9606 - 19:15515342-15516836 unprocessed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENST00000600023
Transcript ID Brain Kidney
ENST00000600023 0.143±0.00 0.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MH CIL_0001MH_0001 CGP 19:15468645-15552317
CIL_00019Y CIL_00019Y_0001 CGP 19:15508493-15630638

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149454 Stau1-008 retained_intron Mus_musculus 0 355
ENSMUST00000109236 Stau1-002 protein_coding Mus_musculus 0 355
ENSMUST00000109238 Stau1-003 protein_coding Mus_musculus 0 355
ENSMUST00000142481 Stau1-006 retained_intron Mus_musculus 0 355
ENSMUST00000109235 Stau1-001 protein_coding Mus_musculus 0 355
ENSMUST00000049412 Stau1-005 protein_coding Mus_musculus 0 342
ENSMUST00000134664 Stau1-009 retained_intron Mus_musculus 4e-27 124

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