C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000601865 PAFAH1B3-003 ENSG00000079462 9606 - 19:42300089-42302777 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonENST00000601865
Transcript ID Bladder Colon
ENST00000601865 0.154±0.00 1.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005V7 CIL_0005V7_0001 CGP 19:42268537-42303546
CIL_0005V8 CIL_0005V8_0001 CGP 19:42297033-42310821

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155118 Pafah1b3-002 protein_coding Mus_musculus 0 394
ENSMUST00000148150 Pafah1b3-005 protein_coding Mus_musculus 0 394
ENSMUST00000005583 Pafah1b3-001 protein_coding Mus_musculus 0 394
ENSMUST00000108410 Pafah1b3-007 protein_coding Mus_musculus 0 298
ENSMUST00000140093 Pafah1b3-008 retained_intron Mus_musculus 0 189

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